DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pgm2a and pgm2l1

DIOPT Version :9

Sequence 1:NP_610453.1 Gene:Pgm2a / 35923 FlyBaseID:FBgn0033377 Length:623 Species:Drosophila melanogaster
Sequence 2:NP_001091955.1 Gene:pgm2l1 / 449945 ZFINID:ZDB-GENE-041008-205 Length:619 Species:Danio rerio


Alignment Length:625 Identity:302/625 - (48%)
Similarity:407/625 - (65%) Gaps:17/625 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 SGGQMLCEIKNMALSGDPELDGEIRKWIRWDKCASTACQIMDAVRAKDWDTLRKRLCTRISFGTA 68
            |.|.:....:.::.:|||.||..:.:|:.|||...|..||...|:......||:|||:|::||||
Zfish     3 SNGDLNANSQCLSATGDPVLDKAVSQWMTWDKNPLTREQIESLVQEGRVVELRRRLCSRMTFGTA 67

  Fly    69 GLRACMRAGFDSMNELVVIQTAQGLCEYIKEQYPDPADWSGRGIVFGYDGR------YNSHRFAE 127
            ||||.|.|||..:|:|.:||:.|||.:|:.:.:|   |...||:|.|||.|      ..|.|.|:
Zfish    68 GLRAAMGAGFARINDLTIIQSTQGLYKYLAKCFP---DLKTRGLVVGYDTRAQASSGCTSERLAK 129

  Fly   128 LSAIVFLNNDFKVWLFKRYVATPMVPFAILRLQCLAGVMVTASHNPKEDNGYKVYWTNGAQIIPP 192
            |:|.|.|..|..|:||..||.||.||:|:::....||||:|||||.||||||||||.|||||..|
Zfish   130 LTAAVMLCKDVPVYLFSTYVPTPFVPYAVMKYGAAAGVMITASHNRKEDNGYKVYWHNGAQIASP 194

  Fly   193 HDEGIQESILNNLEPKGSSWDDSAMCSNTMLEDPYDIVVPPYFDILKKQLPCTSLEANGRCSLSF 257
            ||:.|...|..:.||...||::..:.::.:..||.:.|...|.:.|...  |...|.|.:..|.|
Zfish   195 HDKEILHCIEESAEPWAESWNEDLVENSLLKRDPLEDVCHWYMEELNTL--CFHRELNAKSPLKF 257

  Fly   258 TYTAMHGVGYAFVKQAFARINLKPFISVCEQQEPDPEFPTTPMPNPEEGKTSLDLSIKTAKANSS 322
            .:::.||||:.:|::||.:....|.|.|.||::|||:|.|...||||||::.|:||::.|:...:
Zfish   258 VHSSFHGVGHNYVQRAFQQFGFPPPIPVPEQKDPDPDFSTVSCPNPEEGESVLELSLRLAEREKA 322

  Fly   323 QIILANDPDADRLAVAEVREDGSYKLFSGNEVGALLGWWSLELHKMREPD-CDVSNCVMIASTVS 386
            :|::|.|||||||||||..::..:|:|:|||:.||||||.|...|...|| .|.....|:|:|||
Zfish   323 RIVVATDPDADRLAVAEQNDNCGWKVFTGNELAALLGWWMLFNWKEAHPDPADTERVYMLATTVS 387

  Fly   387 SKILRAMAEREGFQFFETLTGFKWMGNKAIELQQAGKTVLFAFEEAIGFMVGTTVLDKDGVSAAG 451
            ||||.|.|..|||.|.|||.||||:||:..||::|||.|:|:|||:|||:.|..||||||||.|.
Zfish   388 SKILEAFARIEGFHFEETLPGFKWIGNRIHELKKAGKEVIFSFEESIGFLCGNMVLDKDGVSTAA 452

  Fly   452 HLATMACYLRCKLCMTLQEKLRDIYETYGFHTTVSSYVICRCPPVIEQIFERLRTWDEGKADTYP 516
            .:|.||.||..| .::|.::|.:|||.||:|.:.:|||:|..||.|.:||.|||.:  |....||
Zfish   453 VVAEMASYLHTK-NLSLNQQLCNIYEIYGYHISRTSYVLCNDPPTIHRIFSRLRNF--GGQGVYP 514

  Fly   517 TSILNGEYEIENVRDLTTGFDSSTGDKKATLPTSSSSQMITFTFKNGLVVTLRTSGTEPKMKYYA 581
            ||.  |:|.|.::||:|||:|||..|||..||.|.||||:||||:||:|.||||||||||:|||.
Zfish   515 TSC--GDYCITHIRDVTTGYDSSQPDKKCVLPLSKSSQMLTFTFQNGIVATLRTSGTEPKIKYYT 577

  Fly   582 EMCGKPDEKNWAKLTNTMNTMVEAIVEEFYEPSKNGLQRR 621
            |.|..|.|::.:.|...:..:..|:||||.||.||.|..|
Zfish   578 EFCASPGERDISSLDEELRKVAAALVEEFLEPDKNDLLGR 617

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pgm2aNP_610453.1 PTZ00150 23..623 CDD:240294 297/606 (49%)
PGM2 62..604 CDD:100092 271/548 (49%)
pgm2l1NP_001091955.1 PTZ00150 22..618 CDD:240294 297/606 (49%)
PGM2 61..600 CDD:100092 271/548 (49%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 151 1.000 Domainoid score I4314
eggNOG 1 0.900 - - E1_COG1109
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 576 1.000 Inparanoid score I1006
OMA 1 1.010 - - QHG53730
OrthoDB 1 1.010 - - D1041556at2759
OrthoFinder 1 1.000 - - FOG0002126
OrthoInspector 1 1.000 - - mtm6464
orthoMCL 1 0.900 - - OOG6_100912
Panther 1 1.100 - - O PTHR45745
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R913
SonicParanoid 1 1.000 - - X1578
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1413.870

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