DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pgm2a and Pgm1

DIOPT Version :9

Sequence 1:NP_610453.1 Gene:Pgm2a / 35923 FlyBaseID:FBgn0033377 Length:623 Species:Drosophila melanogaster
Sequence 2:NP_524675.1 Gene:Pgm1 / 44010 FlyBaseID:FBgn0003076 Length:560 Species:Drosophila melanogaster


Alignment Length:550 Identity:129/550 - (23%)
Similarity:208/550 - (37%) Gaps:103/550 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    66 GTAGLRACMRAGFD---SMNELVVIQTAQGLCEYIKEQYPDPADWSGRGIVFGYDGRYNSHRFAE 127
            ||:|||..::....   :.|.:..|..|.|            |..:|..:|.|.|||:.....||
  Fly    19 GTSGLRKKVKVFTQPNYTENFVQAILEANG------------AALAGSTLVVGGDGRFYCKEAAE 71

  Fly   128 LSAIVFLNNDFKVWLFKR--YVATPMVPFAILRLQCLAGVMVTASHN---PKEDNGYKVYWTNGA 187
            |...:...|.....|..:  .::||.|...|...:.|.|:::|||||   |:.|.|.|....||.
  Fly    72 LIVRLSAANGVSKLLVGQNGILSTPAVSSLIRHNKALGGIVLTASHNPGGPENDFGIKFNCENGG 136

  Fly   188 QIIPPHDEGIQESILNNLEPKGSSWDDSAMCSNTMLE------DPYDIVVPPY------------ 234
               |..|     :..|::....:...:..:..|..::      ..:||...|:            
  Fly   137 ---PAPD-----AFTNHIYKITTEIKEYKLVRNLQIDISKVGVTSFDIAGKPFTVEVIDSVANYV 193

  Fly   235 ------FDILKKQLPCTSLEANGRCSLSFTYTAMHGVGYAFVKQAFARINLKPFISVCEQQEPDP 293
                  ||..|.: ...|.:|.|: .|.....||:||..::|::.|.. .|....|......|.|
  Fly   194 RHMEEIFDFAKLK-DFVSGKATGK-PLKMRIDAMNGVTGSYVREIFLN-RLGATESSVVHTTPLP 255

  Fly   294 EF-PTTPMPNPEEGKTSLDLSIKTAKANSSQIILANDPDADRLAVAEVREDGSYKLF-SGNEVGA 356
            :| ...|.||....|..:|    |.......|..|.|.|.||..:.     ||...| :.::..|
  Fly   256 DFGGLHPDPNLTYAKDLVD----TVAQGDYDIGAAFDGDGDRNMII-----GSKAFFVTPSDSLA 311

  Fly   357 LLGWWSLELHKMREPDCDVSNCV--MIASTVSSKILRAMAEREGFQFFETLTGFKWMGNKAIELQ 419
            ::.      |.:........|.|  ...|..::..:..:..:.|.:.||..||:|:.||    |.
  Fly   312 VIA------HYLEAIPYFQKNGVQGFARSMPTASAVDLVGRKLGKEVFEVPTGWKYFGN----LM 366

  Fly   420 QAGKTVLFAFEEAIGFMVGTT-VLDKDGVSAAGHLATMACYLRCKLCMTLQEKLRDIYETYG-FH 482
            .||:..|.. ||:.|  .|:. :.:|||:.|.  ||.::......  ..:::.|:..:..|| .:
  Fly   367 DAGRLCLCG-EESFG--TGSNHIREKDGIWAV--LAWISVMQHTG--KGIEDILKQHWSVYGRNY 424

  Fly   483 TTVSSYVICRCPPVIEQI--FERLRTWDEGKADTYPTSILNGEYEIENVRDL--TTGFDSSTGDK 543
            .|...|..|...|..|.:  .|:..|..|....:|.:.  ...|:::...:.  |...|.|...|
  Fly   425 FTRYDYEECASDPCNEMVATMEKTITAPEFVGKSYSSG--GKTYKVKEADNFSYTDPVDKSVATK 487

  Fly   544 KATLPTSSSSQMITFTFKNGLVVTLRTSGT 573
                      |.:...|::|..:.:|.|||
  Fly   488 ----------QGLRIVFEDGSRIVVRLSGT 507

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pgm2aNP_610453.1 PTZ00150 23..623 CDD:240294 128/549 (23%)
PGM2 62..604 CDD:100092 128/549 (23%)
Pgm1NP_524675.1 PLN02307 1..560 CDD:177942 128/549 (23%)
PGM1 6..560 CDD:100087 128/549 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45439080
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.840

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