DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pgm2a and Pgm2b

DIOPT Version :9

Sequence 1:NP_610453.1 Gene:Pgm2a / 35923 FlyBaseID:FBgn0033377 Length:623 Species:Drosophila melanogaster
Sequence 2:NP_610992.2 Gene:Pgm2b / 36649 FlyBaseID:FBgn0033969 Length:628 Species:Drosophila melanogaster


Alignment Length:609 Identity:323/609 - (53%)
Similarity:437/609 - (71%) Gaps:6/609 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 IKNMALSGDPELDGEIRKWIRWDKCASTACQIMDAVRAKDWDTLRKRLCTRISFGTAGLRACMRA 76
            :|.:.|||:.:||.:|:.|:.||:..:|..|:.:|||.:||..||.|||.||::.|.|||..|||
  Fly    17 LKTLELSGEEDLDLQIKNWVMWDRNEATLQQVTEAVRDQDWKALRVRLCHRITYLTTGLRGVMRA 81

  Fly    77 GFDSMNELVVIQTAQGLCEYIKEQYPDPADWSGRGIVFGYDGRYNSHRFAELSAIVFLNNDFKVW 141
            ||||:|::|:|:.|||:|.|:.:.||.......:|:|.||||||||.|||:|.|.|||||||||:
  Fly    82 GFDSLNDVVIIEVAQGICAYLVDAYPSIQKRQTQGVVVGYDGRYNSKRFAQLIATVFLNNDFKVF 146

  Fly   142 LFKRYVATPMVPFAILRLQCLAGVMVTASHNPKEDNGYKVYWTNGAQIIPPHDEGIQESILNNLE 206
            ||.|.:.||.:||.::.||||||::||||||.|||||.||||:||||.:.|||:.|.:.::||||
  Fly   147 LFTRMIPTPFIPFTVVTLQCLAGIVVTASHNVKEDNGIKVYWSNGAQAMAPHDQRIHDYMMNNLE 211

  Fly   207 PKGSSWDDSAMCSNTMLEDPYDIVVPPYFDILKKQLPCTSLEANGRCSLSFTYTAMHGVGYAFVK 271
            ||.|||:.|.:..:.::||||..:.|.:::.||..:|...||.|....|.|.|||:|||||.|::
  Fly   212 PKPSSWETSLVLDHPLVEDPYRQIYPLFYEALKTLIPPIYLETNECSQLRFIYTALHGVGYPFMR 276

  Fly   272 QAFARINLKPFISVCEQQEPDPEFPTTPMPNPEEGKTSLDLSIKTAKANSSQIILANDPDADRLA 336
            :||.:..|||.|.|.||:|.||||||...|||||||.:|.|:||.|.|....::||||||.||||
  Fly   277 EAFYQARLKPVIPVVEQKEADPEFPTLVKPNPEEGKEALKLAIKKADAEHCTLVLANDPDVDRLA 341

  Fly   337 VAEVREDGSYKLFSGNEVGALLGWWSLELHKMREPDCDVSNCVMIASTVSSKILRAMAEREGFQF 401
            |||:...|.:|||:|||:|||||||:||.:|.|.|...|:||:|||:.|||:||.|||..|||.|
  Fly   342 VAELDPRGRWKLFNGNELGALLGWWALENYKTRTPKPAVTNCIMIATLVSSRILAAMARVEGFIF 406

  Fly   402 FETLTGFKWMGNKAIELQQAGKTVLFAFEEAIGFMVGTTVLDKDGVSAAGHLATMACYLRCKLCM 466
            .|.:..|.||.::|:||:::|:||||||||..|:|.|.::.||||:.||..||:||||||....:
  Fly   407 VEGMPSFPWMAHRALELEKSGRTVLFAFEECFGYMFGMSLPDKDGIGAAMQLASMACYLRSTRNV 471

  Fly   467 TLQEKLRDIYETYGFHTTVSSYVICRCPPVIEQIFERLR--TWDEGKADTYPTSILNGEYEIENV 529
            ||.||||:||:|||:|:::||..:...|..|..:|:.||  |.:||    ||..||:.|:|:.::
  Fly   472 TLIEKLREIYDTYGYHSSISSVYMADSPETITSVFDHLRNFTDEEG----YPKFILDEEFEVVHI 532

  Fly   530 RDLTTGFDSSTGDKKATLPTSSSSQMITFTFKNGLVVTLRTSGTEPKMKYYAEMCGKPDEKNWAK 594
            ||||.|.|:|..|.||.:|.:..:|:|||||.||.|||||::..:.|:|..||:||.|:||.|.:
  Fly   533 RDLTIGLDTSFSDGKARMPVTPDAQLITFTFTNGYVVTLRSAPNDIKIKLNAEICGLPEEKQWEE 597

  Fly   595 LTNTMNTMVEAIVEEFYEPSKNGL 618
            |.:.:|.|..|:||||.:|.:|||
  Fly   598 LHDKLNRMTNAVVEEFLQPEENGL 621

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pgm2aNP_610453.1 PTZ00150 23..623 CDD:240294 319/598 (53%)
PGM2 62..604 CDD:100092 292/543 (54%)
Pgm2bNP_610992.2 PTZ00150 26..621 CDD:240294 317/598 (53%)
PGM2 67..607 CDD:100092 292/543 (54%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45448735
Domainoid 1 1.000 151 1.000 Domainoid score I4314
eggNOG 1 0.900 - - E1_COG1109
Homologene 1 1.000 - - H6693
Inparanoid 1 1.050 576 1.000 Inparanoid score I1006
Isobase 1 0.950 - 0.815465 Normalized mean entropy S1166
OMA 1 1.010 - - QHG53730
OrthoDB 1 1.010 - - D1041556at2759
OrthoFinder 1 1.000 - - FOG0002126
OrthoInspector 1 1.000 - - mtm6464
orthoMCL 1 0.900 - - OOG6_100912
Panther 1 1.100 - - P PTHR45745
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1578
1413.760

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