DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pgm2a and F21D5.1

DIOPT Version :9

Sequence 1:NP_610453.1 Gene:Pgm2a / 35923 FlyBaseID:FBgn0033377 Length:623 Species:Drosophila melanogaster
Sequence 2:NP_501500.1 Gene:F21D5.1 / 177678 WormBaseID:WBGene00009006 Length:550 Species:Caenorhabditis elegans


Alignment Length:594 Identity:115/594 - (19%)
Similarity:177/594 - (29%) Gaps:235/594 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly   152 VPFAILR-----------LQCLAGVMVTASHNPKEDNGYKVYWTNGAQI---------------- 189
            :||.:.|           |....|||:||||||..|||.|:...:|..:                
 Worm    44 LPFIVFRCAYVASLRARQLNSAIGVMITASHNPSCDNGVKLVDPSGDMLNEQWEIYATEVVNATD 108

  Fly   190 --IPPHDEGIQESI----------------------LNNLEPKGSS-----WDDSAMCSNTML-- 223
              :|.....:::.|                      |.|....|::     :||..:.|..||  
 Worm   109 AELPAAVRALEKQISVGKTQLSRVVCGMDTRCSGPCLMNAARAGAALFNVQFDDIGVVSTPMLHY 173

  Fly   224 ---------------------------------EDPYD------IVV-------PPYFDILKKQL 242
                                             |:|.|      ::|       .|.|..|.:::
 Worm   174 AVKAFNEPKFAEPTHDGYYSAIADSFKKLYEITEEPKDSRYQPKVIVDCANGVGAPRFRNLLERI 238

  Fly   243 PCTSLEANGRCSLSFTYTAMHGVGYAFVKQAFARINLKPFISVCEQQEPDPEFPTTPMPNPEEGK 307
            |.:.||...|   :.:.....|.|..|||              ..|:.|....||...|      
 Worm   239 PSSLLEVEFR---NESEELNQGCGADFVK--------------ISQKLPANFSPTAAEP------ 280

  Fly   308 TSLDLSIKTAKANSSQIILANDPDADRL-----AVAEVREDGSYKLFSGNEVGALLGWWSLELHK 367
                   |.|         :.|.|||||     ..:|..|....:||.|:::..|:      :..
 Worm   281 -------KCA---------SFDGDADRLMYFRAKASENSESNDAELFDGDKIAVLI------VTY 323

  Fly   368 MREPDCDVSNC---------VMIASTVSSKILRAMAEREGFQFFETLTGFKWMGNKAIELQQAGK 423
            :||...|..|.         ::..:..:....|.:.|:.|.:.....||.|.:...|.|      
 Worm   324 IREQLKDYENSTPMERLRLGIVQTAYANGSSTRYIREKLGIEPIIVPTGVKHLHEAASE------ 382

  Fly   424 TVLFAFEEAIGFMVGTTVLDKDGVSAAGHLATMACYLRCKLCMTLQEKLRDIYETYGFHTTVSSY 488
                 |:..|.|            .|.||...:               ..:|::.....|...|.
 Worm   383 -----FDIGIYF------------EANGHGTVV---------------FSEIFDRIIRRTPTESL 415

  Fly   489 VICRCPPVIEQIFERL--RTWDEGKADTYPTSILNGEY-------------EIENVRDLTTGFDS 538
            .:.|.     .:|.|:  .|..:..||......:...|             ::.||:......|.
 Worm   416 PLRRL-----ALFSRVINETVGDAFADLLAVEAVLRHYGWSMDDWAEKLYRDVPNVQIKVPVIDR 475

  Fly   539 S---TGDKKATL--PTSSSSQMITFTFK-NGLVVTLRTSGTEPKMKYYAE--------MCGKPDE 589
            |   |.:.:.||  |......:.|...| |.....:|.||||..::.|||        ..||..|
 Worm   476 SIFKTTNAEQTLVKPVGIQKMIDTDVAKYNNSRAFIRPSGTENIVRVYAEADTVENTLQLGKSLE 540

  Fly   590 KNWAKLTNT 598
            :....|.|:
 Worm   541 QVVLNLCNS 549

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pgm2aNP_610453.1 PTZ00150 23..623 CDD:240294 115/594 (19%)
PGM2 62..604 CDD:100092 115/594 (19%)
F21D5.1NP_501500.1 PLN02895 17..547 CDD:215485 113/590 (19%)
PGM3 31..543 CDD:100088 113/586 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1109
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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