DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pgm2a and pgm-3

DIOPT Version :10

Sequence 1:NP_610453.1 Gene:Pgm2a / 35923 FlyBaseID:FBgn0033377 Length:623 Species:Drosophila melanogaster
Sequence 2:NP_501500.1 Gene:pgm-3 / 177678 WormBaseID:WBGene00009006 Length:550 Species:Caenorhabditis elegans


Alignment Length:594 Identity:115/594 - (19%)
Similarity:177/594 - (29%) Gaps:235/594 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly   152 VPFAILR-----------LQCLAGVMVTASHNPKEDNGYKVYWTNGAQI---------------- 189
            :||.:.|           |....|||:||||||..|||.|:...:|..:                
 Worm    44 LPFIVFRCAYVASLRARQLNSAIGVMITASHNPSCDNGVKLVDPSGDMLNEQWEIYATEVVNATD 108

  Fly   190 --IPPHDEGIQESI----------------------LNNLEPKGSS-----WDDSAMCSNTML-- 223
              :|.....:::.|                      |.|....|::     :||..:.|..||  
 Worm   109 AELPAAVRALEKQISVGKTQLSRVVCGMDTRCSGPCLMNAARAGAALFNVQFDDIGVVSTPMLHY 173

  Fly   224 ---------------------------------EDPYD------IVV-------PPYFDILKKQL 242
                                             |:|.|      ::|       .|.|..|.:::
 Worm   174 AVKAFNEPKFAEPTHDGYYSAIADSFKKLYEITEEPKDSRYQPKVIVDCANGVGAPRFRNLLERI 238

  Fly   243 PCTSLEANGRCSLSFTYTAMHGVGYAFVKQAFARINLKPFISVCEQQEPDPEFPTTPMPNPEEGK 307
            |.:.||...|   :.:.....|.|..|||              ..|:.|....||...|      
 Worm   239 PSSLLEVEFR---NESEELNQGCGADFVK--------------ISQKLPANFSPTAAEP------ 280

  Fly   308 TSLDLSIKTAKANSSQIILANDPDADRL-----AVAEVREDGSYKLFSGNEVGALLGWWSLELHK 367
                   |.|         :.|.|||||     ..:|..|....:||.|:::..|:      :..
 Worm   281 -------KCA---------SFDGDADRLMYFRAKASENSESNDAELFDGDKIAVLI------VTY 323

  Fly   368 MREPDCDVSNC---------VMIASTVSSKILRAMAEREGFQFFETLTGFKWMGNKAIELQQAGK 423
            :||...|..|.         ::..:..:....|.:.|:.|.:.....||.|.:...|.|      
 Worm   324 IREQLKDYENSTPMERLRLGIVQTAYANGSSTRYIREKLGIEPIIVPTGVKHLHEAASE------ 382

  Fly   424 TVLFAFEEAIGFMVGTTVLDKDGVSAAGHLATMACYLRCKLCMTLQEKLRDIYETYGFHTTVSSY 488
                 |:..|.|            .|.||...:               ..:|::.....|...|.
 Worm   383 -----FDIGIYF------------EANGHGTVV---------------FSEIFDRIIRRTPTESL 415

  Fly   489 VICRCPPVIEQIFERL--RTWDEGKADTYPTSILNGEY-------------EIENVRDLTTGFDS 538
            .:.|.     .:|.|:  .|..:..||......:...|             ::.||:......|.
 Worm   416 PLRRL-----ALFSRVINETVGDAFADLLAVEAVLRHYGWSMDDWAEKLYRDVPNVQIKVPVIDR 475

  Fly   539 S---TGDKKATL--PTSSSSQMITFTFK-NGLVVTLRTSGTEPKMKYYAE--------MCGKPDE 589
            |   |.:.:.||  |......:.|...| |.....:|.||||..::.|||        ..||..|
 Worm   476 SIFKTTNAEQTLVKPVGIQKMIDTDVAKYNNSRAFIRPSGTENIVRVYAEADTVENTLQLGKSLE 540

  Fly   590 KNWAKLTNT 598
            :....|.|:
 Worm   541 QVVLNLCNS 549

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pgm2aNP_610453.1 PTZ00150 23..623 CDD:240294 115/594 (19%)
pgm-3NP_501500.1 PGM3 31..543 CDD:100088 113/586 (19%)

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