DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pgm2a and Pgm3

DIOPT Version :9

Sequence 1:NP_610453.1 Gene:Pgm2a / 35923 FlyBaseID:FBgn0033377 Length:623 Species:Drosophila melanogaster
Sequence 2:NP_082628.3 Gene:Pgm3 / 109785 MGIID:97566 Length:542 Species:Mus musculus


Alignment Length:537 Identity:105/537 - (19%)
Similarity:175/537 - (32%) Gaps:182/537 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   155 AILR---LQCLAGVMVTASHNPKEDNGYKVYWTNGAQIIP------------------------- 191
            |:||   .:...||||||||||:||||.|:....|..:.|                         
Mouse    46 AVLRSKQTRSTIGVMVTASHNPEEDNGVKLVDPLGEMLAPSWEEHATCLASAEEQDVRQVLAAIV 110

  Fly   192 --------------------PHDEGIQESILNNLEPKGSSWDDSAMCSNTMLE------------ 224
                                |..|.:.:|:::.:...|..:.|..:.:...|.            
Mouse   111 EKEAVDLTQTAFVVIARDTRPSSEKLSQSVIDGVTVLGGQFHDYGLLTTPQLHYMVYCRNSGGRY 175

  Fly   225 -----DPYDIVVPPYFDILKKQLPCTSLEANGRCSLSFTYTAMHGVGYAFVKQA---FAR-INLK 280
                 :.|...:...|..|..|:.|     :|....|......:|:|...:::.   |:| :::.
Mouse   176 GQATVEGYCQKLSKAFVDLTNQVSC-----SGDVKRSVKVDCANGIGALKLREMEHYFSRGLSVL 235

  Fly   281 PFIS--------------VCEQQEPDPEFPTTPMPNPEEGKTSLDLSIKTAKANSSQIILANDPD 331
            .|..              |..||:|         |...|.|             |.:...:.|.|
Mouse   236 LFNDGTQGRLNHLCGADFVKSQQKP---------PQGIEMK-------------SGERCCSFDGD 278

  Fly   332 ADRLAVAEVREDGSYKLFSGNEVGALLGWWSLELHKMREPDCDVSNCVMIASTVSSKILRAMAER 396
            |||:.......||.:.|..|:::..|:..:..||  :.|....|:..|:..:..:....|.:.|.
Mouse   279 ADRIVYYYCDADGHFHLIDGDKIATLISSFLKEL--LLEIGESVNLGVVQTAYANGSSTRYLEEV 341

  Fly   397 EGFQFFETLTGFKWMGNKAIELQ-----QAGKTVLFAFEEAIGFMVGTTV--LDKDGVSAAGHLA 454
            .....:.|.||.|.:.:||.|..     :|.......|.||:...:....  ||.....||..||
Mouse   342 MKVPVYCTKTGVKHLHHKAQEFDIGVYFEANGHGTALFSEAVEVKIKRLAQELDDGKGKAARTLA 406

  Fly   455 TMACYLRCKLCMTLQEKLRDIY-ETYGFHTTVSSYVICRCPPVIEQIFE----RLRTWDEGKADT 514
            ::.                |:: :..|  ..:|..:      |||.|..    .::.||....| 
Mouse   407 SII----------------DLFNQAAG--DAISDML------VIEAILALKGLTVQQWDAIYVD- 446

  Fly   515 YPTSILNGEYEIENVRDLTTGFDSSTGDKKATLPTSSSSQMIT--------------FTFKNGLV 565
                :.|.:.:::            ..|::....|.:..|.:|              :|.....|
Mouse   447 ----LPNRQLKVK------------VADRRVISTTDAERQAVTPPGLQEAINDLVKKYTLARAFV 495

  Fly   566 VTLRTSGTEPKMKYYAE 582
               |.||||..::.|||
Mouse   496 ---RPSGTEDIVRVYAE 509

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pgm2aNP_610453.1 PTZ00150 23..623 CDD:240294 105/537 (20%)
PGM2 62..604 CDD:100092 105/537 (20%)
Pgm3NP_082628.3 PLN02895 1..538 CDD:215485 105/537 (20%)
PGM3 22..527 CDD:100088 105/537 (20%)
Substrate binding. /evidence=ECO:0000250|UniProtKB:Q9P4V2 370..372 0/1 (0%)
Substrate binding. /evidence=ECO:0000250|UniProtKB:Q9P4V2 496..500 2/3 (67%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1109
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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