DRSC/TRiP Functional Genomics Resources

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Protein Alignment Vang and vangl2

DIOPT Version :10

Sequence 1:NP_001260819.1 Gene:Vang / 35922 FlyBaseID:FBgn0015838 Length:608 Species:Drosophila melanogaster
Sequence 2:NP_705960.1 Gene:vangl2 / 245949 ZFINID:ZDB-GENE-020507-3 Length:526 Species:Danio rerio


Alignment Length:597 Identity:253/597 - (42%)
Similarity:348/597 - (58%) Gaps:87/597 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MENESVKSEHSGRSRRSRNHNNNGGGGGGGGGGGGGSVNNGYHRERDRSRHSHRSTHSSKSAKGF 65
            |:|||..|.:|.:|..||:...                    ||:|       |..|.|||....
Zfish     1 MDNESQYSGYSYKSSHSRSSRK--------------------HRDR-------RDRHRSKSRDSS 38

  Fly    66 QRGDMA--------PYQTSVNMTGDGSHDGQEVIEVQILPQDENWGENTTAVTGNTSEQSISMED 122
            .|||.:        |...:.:..||              .:|:||||.||.||| |||.|:|.||
Zfish    39 SRGDKSVTIQAPGEPLLDAESTRGD--------------DRDDNWGETTTVVTG-TSEHSVSNED 88

  Fly   123 INNMWHRESDKGFSFACRRYVESSFYFLLGCGAFFSPVAMVVMPYVGFFPSAFDHPEITQTVRTQ 187
            :... .:|.:......|||:.......:||..|..:|:|.:::|.:.:              |..
Zfish    89 LTRA-SKELEDSSPLECRRFAGPIVSGVLGLFALLTPLAFLLLPQLLW--------------RDS 138

  Fly   188 LLACSEQCKGQLVSLAARLLLLAIGLWAVFMRRTSATMPRIFLYRALVLLLVTICTFAYWLFYIV 252
            |..|...|:|..||||.:||:|.|..||:|:|.:.:|:||.|::|.|::.||.:...:|||||.|
Zfish   139 LEPCGTPCEGLYVSLAFKLLVLLISSWALFLRPSRSTLPRFFVFRCLLMALVFLFVASYWLFYGV 203

  Fly   253 QVTNGAKIVVETGGDAVDYKSLVGYATNFVDTLLFIHYVAVVLLELRHQQPCYYIKIIRSPDGVS 317
            :|....:         .||:.:||||.:.||.||||.|:|:||||:||.:|.:.:|::|:.||.|
Zfish   204 RVLEPRE---------RDYRGIVGYAVSLVDALLFIQYLALVLLEVRHLRPAFCLKVVRTTDGAS 259

  Fly   318 RSYMLGQLSIQRAAVWVLQHYYVDFPIFNPYLERIPISVSKSQRNKISNSFKYYEVDGVSNSQQQ 382
            |.|.:|.|||||||||||.|||.|||::||.|..:|    ||..:|..:.||.|.: |..||...
Zfish   260 RFYNVGHLSIQRAAVWVLDHYYTDFPVYNPALLNLP----KSILSKKMSGFKVYSL-GEENSTNN 319

  Fly   383 S--QSRAVLAANARRRDSSHNERFYEEHEYERRVKKRRARLITAAEEAFTHIKRIHNEPAPALP- 444
            |  ||||::||.|||||:||||.:|||.|.:|||:||:|||:.|.|||||||||:.::.|.|.| 
Zfish   320 STGQSRAMIAAAARRRDNSHNEYYYEEAEMDRRVRKRKARLVVAVEEAFTHIKRLQDDEAAASPK 384

  Fly   445 -----LDPQEAASAVFPSMARALQKYLRVTRQQPRHTFESILKHLAHCLKHDLSPRAFLEPYLTE 504
                 :||:|||.|:|..||||:|||||.|||||.|:.|||:.||..|:.|:::|:||||.|||.
Zfish   385 HPREVMDPREAAQAIFAPMARAMQKYLRTTRQQPYHSMESIISHLQFCITHNMTPKAFLERYLTP 449

  Fly   505 SPVMQSEKERRWVQSWSLICDEIVSRPIGNECTFQLIQNDVSLMVTVHKLPHFNLAEEVVDPKSN 569
            .|.||.::|....:.|:|:.:|.|:..:.....|.|.:.|.:|:|||..||..||.||.:||||:
Zfish   450 GPTMQYQRENGRGRQWTLVSEEPVTAALRQGLVFSLRRLDFALVVTVTPLPFLNLGEEFIDPKSH 514

  Fly   570 KFVLKLNSETSV 581
            |||::|.|||||
Zfish   515 KFVMRLQSETSV 526

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
VangNP_001260819.1 Strabismus 43..581 CDD:461971 242/553 (44%)
vangl2NP_705960.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..95 40/136 (29%)
Strabismus 41..526 CDD:461971 233/528 (44%)
PDZ-binding. /evidence=ECO:0000255 523..526 2/2 (100%)

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