DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG8078 and ctu1

DIOPT Version :9

Sequence 1:NP_610451.1 Gene:CG8078 / 35920 FlyBaseID:FBgn0033375 Length:343 Species:Drosophila melanogaster
Sequence 2:NP_001015743.1 Gene:ctu1 / 548460 XenbaseID:XB-GENE-5872210 Length:341 Species:Xenopus tropicalis


Alignment Length:343 Identity:240/343 - (69%)
Similarity:281/343 - (81%) Gaps:2/343 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MHIICKSQCGNRAALKRPKTGDALCKECFFAAFEAEIHHTISSSNLFRRGEKVAVAASGGKDSTV 65
            |.:.|.|....||.|:|||||.:|||:|||.|||.||||||.|:.||..||||.:.|||||||||
 Frog     1 MPVNCSSCEERRAVLRRPKTGHSLCKDCFFHAFEEEIHHTIVSAKLFNPGEKVGIGASGGKDSTV 65

  Fly    66 LAHVLKLLNERHNYGLELVLLSIDEGITGYRDDSLETVKQNRDDYQMPLKILSYEELYGWTMDRI 130
            ||||||:||||:.|||:|:|:|:||||:|||||||||||:|:..|::||||:||:||||||||:|
 Frog    66 LAHVLKVLNERYAYGLDLILVSVDEGISGYRDDSLETVKRNQQQYELPLKIVSYQELYGWTMDQI 130

  Fly   131 VAQIGRSNNCTFCGVFRRQALDRGAKLLGVDSIATGHNADDIAETVLMNVLRGDTARLRRCTSIR 195
            |.|:|..||||||||||||||||||.:|||:.|.|||||||||||||||.||||.|||||||||.
 Frog   131 VKQVGLKNNCTFCGVFRRQALDRGAMMLGVNKICTGHNADDIAETVLMNFLRGDIARLRRCTSIT 195

  Fly   196 TGGGEDTIPRVKPLKYSYEKEIVMYAHYKKLVYFSTECVFAPNAYRGHARAFLKDLEKVRPSVIM 260
            | |.|..|||.|||||:||||||:||::|||.||||||:::||||||||||||||||.:|||.||
 Frog   196 T-GSEGAIPRCKPLKYAYEKEIVLYAYFKKLDYFSTECIYSPNAYRGHARAFLKDLEAIRPSSIM 259

  Fly   261 DIIYSGEQLRFKDTVKKPERGTCTRCGFVSSQQPCKACVLLEGLNRGLPKLGIGKKSKGERMIAK 325
            |||:|||.|..|:.|:.|.:|||||||::|||..|||||||||||||||||||||..|....:..
 Frog   260 DIIHSGENLSVKEDVRMPVQGTCTRCGYISSQSLCKACVLLEGLNRGLPKLGIGKHHKLHHKLLS 324

  Fly   326 QNQELALRERANLVKNDF 343
            | :.|:.:|...|...||
 Frog   325 Q-EPLSEQEERKLKAVDF 341

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8078NP_610451.1 TilS 28..311 CDD:223115 213/282 (76%)
Alpha_ANH_like_II 52..239 CDD:238951 141/186 (76%)
TIGR00269 203..304 CDD:129370 74/100 (74%)
ctu1NP_001015743.1 Alpha_ANH_like_II 52..238 CDD:238951 141/186 (76%)
zn-ribbon_14 202..303 CDD:391289 74/100 (74%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 284 1.000 Domainoid score I1613
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H13513
Inparanoid 1 1.050 489 1.000 Inparanoid score I1391
OMA 1 1.010 - - QHG62166
OrthoDB 1 1.010 - - D455439at33208
OrthoFinder 1 1.000 - - FOG0003810
OrthoInspector 1 1.000 - - oto103435
Panther 1 1.100 - - LDO PTHR11807
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R260
SonicParanoid 1 1.000 - - X3171
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1212.110

Return to query results.
Submit another query.