DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dbp45A and RRP3

DIOPT Version :10

Sequence 1:NP_476927.1 Gene:Dbp45A / 35917 FlyBaseID:FBgn0010220 Length:521 Species:Drosophila melanogaster
Sequence 2:NP_011932.2 Gene:RRP3 / 856462 SGDID:S000001107 Length:501 Species:Saccharomyces cerevisiae


Alignment Length:427 Identity:167/427 - (39%)
Similarity:245/427 - (57%) Gaps:13/427 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 FQILGLRPWLVKQLTKLGLKGATPIQQKCIPAILAGQDCIGAAKTGSGKTFAFALPILERLSEEP 73
            |..|.|.|.|::....|.....||||.|.||..|.|.|.||.|:||||||.|||:|||.||..:.
Yeast    83 FSELNLVPELIQACKNLNYSKPTPIQSKAIPPALEGHDIIGLAQTGSGKTAAFAIPILNRLWHDQ 147

  Fly    74 VSHFALVLTPTHELAYQISEQFLVAGQAMGVRVCVVSGGTDQMVESQKLMQRPHIVVAMPGRLAD 138
            ..::|.:|.||.|||.||.|.|...|..||||...:.||.:.|.:::.||::|||::|.||||.|
Yeast   148 EPYYACILAPTRELAQQIKETFDSLGSLMGVRSTCIVGGMNMMDQARDLMRKPHIIIATPGRLMD 212

  Fly   139 HLTGCDTFSFDNLKYLVVDEADRMLNGDFDESLSIIERCLP-KTRQNLFFSATMK---DFIKESS 199
            ||.....||...||:||:|||||:|:.:|...|..|.:.:| :.|....|||||.   |.::.:|
Yeast   213 HLENTKGFSLRKLKFLVMDEADRLLDMEFGPVLDRILKIIPTQERTTYLFSATMTSKIDKLQRAS 277

  Fly   200 IFPIASDCFEWSQDSDVATVETLDQRYLLCADYDRDMVLIEALRKYREENENANVMIFTNTKKYC 264
            :    ::..:.:..:...||:||.|..::.....::..||..|.::    ....::|||.||...
Yeast   278 L----TNPVKCAVSNKYQTVDTLVQTLMVVPGGLKNTYLIYLLNEF----IGKTMIIFTRTKANA 334

  Fly   265 QLLSMTLKNMEIDNVCLHGFMRQKERVAALSRFKSNQIRTLIATDVAARGLDIPSVELVMNHMLP 329
            :.||.....:|.....|||.:.|.:|:.:|..||:.:...|:||||||||||||||::|:|:.:|
Yeast   335 ERLSGLCNLLEFSATALHGDLNQNQRMGSLDLFKAGKRSILVATDVAARGLDIPSVDIVVNYDIP 399

  Fly   330 RTPKEYIHRVGRTARAGRKGMSISIFRFPRDLELLAAIEEEINTKLTEHPIDQRMVERIFMQVNV 394
            ...|.|||||||||||||.|.|||:.. ..||||:..|||.:..||.:..:|:.::..:...|:.
Yeast   400 VDSKSYIHRVGRTARAGRSGKSISLVS-QYDLELILRIEEVLGKKLPKESVDKNIILTLRDSVDK 463

  Fly   395 TRRESEMQLDNNDFDERAQNYRRKTWIMEGKDPDQME 431
            ...|..|:::..:.::.|:...|:..:|..::.|..|
Yeast   464 ANGEVVMEMNRRNKEKIARGKGRRGRMMTRENMDMGE 500

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Dbp45ANP_476927.1 SrmB 9..381 CDD:440279 158/375 (42%)
RRP3NP_011932.2 SrmB 82..489 CDD:440279 164/414 (40%)

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