DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Dbp45A and ddx47

DIOPT Version :9

Sequence 1:NP_476927.1 Gene:Dbp45A / 35917 FlyBaseID:FBgn0010220 Length:521 Species:Drosophila melanogaster
Sequence 2:NP_001018522.1 Gene:ddx47 / 553715 ZFINID:ZDB-GENE-050522-359 Length:512 Species:Danio rerio


Alignment Length:433 Identity:172/433 - (39%)
Similarity:249/433 - (57%) Gaps:15/433 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 FQILGLRPWLVKQLTKLGLKGATPIQQKCIPAILAGQDCIGAAKTGSGKTFAFALPILERLSEEP 73
            |:.||:...|.:...:||.|..|.||.:.||..|.|:|.||.|:||||||.|||:|:|:.|....
Zfish    81 FKELGVTEVLCEACDQLGWKKPTKIQIEAIPVALQGRDVIGLAETGSGKTGAFAVPVLQSLLACA 145

  Fly    74 VSHFALVLTPTHELAYQISEQFLVAGQAMGVRVCVVSGGTDQMVESQKLMQRPHIVVAMPGRLAD 138
            .....||||||.|||:||:|||...|.::||:..|:.||.|.|.::..|.::||:|:|.||||.|
Zfish   146 QRLHTLVLTPTRELAFQIAEQFDALGSSIGVKTAVIVGGIDMMSQALVLAKKPHVVIATPGRLID 210

  Fly   139 HLTGCDTFSFDNLKYLVVDEADRMLNGDFDESLSIIERCLPKTRQNLFFSATMKDFIKESSIFPI 203
            |:.....|:...|||||:|||||:||.||:..:..|.:.:|:.|:...|||||...:::.....:
Zfish   211 HMENTKGFNLRALKYLVMDEADRILNMDFESEVDKILKVIPRDRRTFLFSATMTKKVQKLQRAAL 275

  Fly   204 ASDCFEWSQDSDVATVETLDQRYLLCADYDRDMVLIEALRKYREENENA--NVMIFTNTKKYCQL 266
             .|..:.|..|..|||:.|.|.|:......:|..|:..|      ||.|  :.|:|..|....|.
Zfish   276 -QDPVKCSVSSKYATVDKLQQFYIFIPSKYKDCYLVSIL------NELAGNSFMVFCGTCNNTQR 333

  Fly   267 LSMTLKNMEIDNVCLHGFMRQKERVAALSRFKSNQIRTLIATDVAARGLDIPSVELVMNHMLPRT 331
            :::.|:|:.|..:.|||.|.|.:|:.||::|||.....|:|||||:||||||.|:.|:|..:|..
Zfish   334 VALLLRNLGITAIPLHGQMSQNKRLGALNKFKSKSRSVLLATDVASRGLDIPHVDCVINFDIPTH 398

  Fly   332 PKEYIHRVGRTARAGRKGMSISIFRFPRDLELLAAIEEEINTKLTEHPIDQRMVERIFMQVNVTR 396
            .|:|||||||||||||.|.||: |....|:||...||..|..||...|..:..|..:..:|:..:
Zfish   399 SKDYIHRVGRTARAGRSGKSIT-FVTQYDVELFQRIEALIGKKLPAFPTQEEEVMMLVERVSEAQ 462

  Fly   397 RESEMQLDNNDFDERAQNYRRKTWIMEGKDPDQMEALYRKKQK 439
            |.:.:::     .|.::..:|.:...|..:..:..:..|||.|
Zfish   463 RFARIEM-----KESSEKRKRPSAAQEVDEDGEQSSGVRKKVK 500

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Dbp45ANP_476927.1 SrmB 8..490 CDD:223587 172/433 (40%)
DEADc 9..197 CDD:238167 86/187 (46%)
Helicase_C 239..346 CDD:278689 49/108 (45%)
ddx47NP_001018522.1 PRK11192 79..478 CDD:236877 166/409 (41%)
DEADc 81..282 CDD:238167 87/201 (43%)
HELICc 292..421 CDD:238034 60/135 (44%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D314577at33208
OrthoFinder 1 1.000 - - FOG0001029
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.920

Return to query results.
Submit another query.