DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Dbp45A and Rm62

DIOPT Version :9

Sequence 1:NP_476927.1 Gene:Dbp45A / 35917 FlyBaseID:FBgn0010220 Length:521 Species:Drosophila melanogaster
Sequence 2:NP_524243.2 Gene:Rm62 / 40739 FlyBaseID:FBgn0003261 Length:719 Species:Drosophila melanogaster


Alignment Length:393 Identity:127/393 - (32%)
Similarity:201/393 - (51%) Gaps:34/393 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 NP---FQILGLRPWLVKQLTKLGLKGATPIQQKCIPAILAGQDCIGAAKTGSGKTFAFALPILER 68
            ||   |..:.|..:::|::.:.|.|..|.||.:..|..::|.:.:|.||||||||..:.||.:..
  Fly   278 NPIQDFSEVHLPDYVMKEIRRQGYKAPTAIQAQGWPIAMSGSNFVGIAKTGSGKTLGYILPAIVH 342

  Fly    69 L-SEEPVSH----FALVLTPTHELAYQISEQFLVAGQAMGVRVCVVSGGTDQMVESQKLMQRPHI 128
            : :::|:..    .||||.||.|||.||.:.....|.:..||...|.||..:..:.:.|.:...|
  Fly   343 INNQQPLQRGDGPIALVLAPTRELAQQIQQVATEFGSSSYVRNTCVFGGAPKGGQMRDLQRGCEI 407

  Fly   129 VVAMPGRLADHLTGCDTFSFDNLK---YLVVDEADRMLNGDFDESLSIIERCLPKTRQNLFFSAT 190
            |:|.||||.|.|:...|    |||   |||:|||||||:..|:..:..|...:...||.|.:|||
  Fly   408 VIATPGRLIDFLSAGST----NLKRCTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLMWSAT 468

  Fly   191 MKDFIKE------SSIFPIASDCFEWSQDSDVATVETLDQRYLLCADYDRDMVLIEALRKYREEN 249
            ....:|:      .:...|.....|.|.:.::..|  :|    :|.::.::..|...|....:.:
  Fly   469 WPKEVKQLAEDFLGNYIQINIGSLELSANHNIRQV--VD----VCDEFSKEEKLKTLLSDIYDTS 527

  Fly   250 EN-ANVMIFTNTKKYCQLLSMTLKNMEIDNVCLHGFMRQKERVAALSRFKSNQIRTLIATDVAAR 313
            |: ..::||..||:....|...:::..:....:||...|.||...|..|:|.:...|:|||||||
  Fly   528 ESPGKIIIFVETKRRVDNLVRFIRSFGVRCGAIHGDKSQSERDFVLREFRSGKSNILVATDVAAR 592

  Fly   314 GLDIPSVELVMNHMLPRTPKEYIHRVGRTARAGRKGMSISIF------RFPRDLELLAAIEEEIN 372
            |||:..::.|:|...|:..::||||:|||.|:..||.|.:.|      :....:::|....:|||
  Fly   593 GLDVDGIKYVINFDYPQNSEDYIHRIGRTGRSNTKGTSFAFFTKNNAKQAKALVDVLREANQEIN 657

  Fly   373 TKL 375
            ..|
  Fly   658 PAL 660

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Dbp45ANP_476927.1 SrmB 8..490 CDD:223587 126/392 (32%)
DEADc 9..197 CDD:238167 71/195 (36%)
Helicase_C 239..346 CDD:278689 37/107 (35%)
Rm62NP_524243.2 PTZ00424 280..656 CDD:185609 121/385 (31%)
DEADc 283..488 CDD:238167 72/208 (35%)
HELICc 499..633 CDD:238034 44/139 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45451689
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.840

Return to query results.
Submit another query.