DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dbp45A and mus301

DIOPT Version :9

Sequence 1:NP_476927.1 Gene:Dbp45A / 35917 FlyBaseID:FBgn0010220 Length:521 Species:Drosophila melanogaster
Sequence 2:NP_648178.1 Gene:mus301 / 38905 FlyBaseID:FBgn0002899 Length:1051 Species:Drosophila melanogaster


Alignment Length:630 Identity:124/630 - (19%)
Similarity:218/630 - (34%) Gaps:186/630 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 QILGLRPWLVKQ--LTKLGLKGATPIQQKC--IPAILAGQDCIGAAKTGSGKTFA---------- 60
            :..|| |..||:  |...|:......|.:|  :|||...::.|.|..|..|||..          
  Fly   243 EFYGL-PDKVKKMILEHKGINSLYEWQDECLNLPAIRQRKNLIYALPTSGGKTLVAEILMLRELL 306

  Fly    61 -------FALPILERLSEEPVSHFALVLTPTHELAYQISEQFLVAGQAMGVRVC----------- 107
                   |.||.:. :.:|.||    .::|     :.|...|:|.....|...|           
  Fly   307 CRERNVLFILPYVS-IVQEKVS----AMSP-----FAIDLDFIVEEYTAGKGKCPPQPRRKRRSL 361

  Fly   108 ----VVSGGT--DQMVESQKLMQRPH-IVVAMPGRLADHLTG-------CDTF----SFDNLKYL 154
                :..|..  |.:::    :|||| |.:.:...|  ||.|       .:.|    .|.|....
  Fly   362 FIASIEKGAVLMDSLID----VQRPHEIGLVVVDEL--HLIGEKGRGATLEAFLTKVMFLNANIQ 420

  Fly   155 VV---------DEADRMLNGDFDESLSIIERCLPKTRQNLFFSATMKDFIK-------------- 196
            :|         .|....||.|.            .||.  |....:|::||              
  Fly   421 IVGMSATIGNLSEISSFLNADV------------YTRG--FRPVELKEYIKCGPDLLEINSAGQT 471

  Fly   197 -ESSIFPIASDCFEWSQDSDVATVETLDQRYLL-----CA-------------DYDRDMVLIEAL 242
             |....|..|..:.:|:     .|:..|..:|.     ||             :.:...:|:..:
  Fly   472 LEEIFVPSRSVEYNYSE-----AVKRADPDHLAGLISECAPEHCCLVFCPSRKNCENVALLLSRI 531

  Fly   243 ---RKYREENENANVMIFTNTKKYCQLLSMTL-KNMEIDNVCLHGFMRQKERVAALSRFKSNQIR 303
               .|:.|...:..:.:.....|.|.:||..| |.:.......|..:...||....:.::...:.
  Fly   532 VPKHKFFEHRRSEKLDLMDALDKMCGILSPVLAKTLPYGIAYHHSGLTTDERKYIETAYRFGVVT 596

  Fly   304 TLIATDVAARGLDIPSVELVMNHMLPRTPKEYI------HRVGRTARA--GRKGMSISIFRFPRD 360
            .:..|...|.|:::|:..:::.  .|...:|::      ..|||..||  |..|.||.|.:...:
  Fly   597 VICCTSTLAAGVNLPAKRVIIR--APYVGQEFLTLCKYKQMVGRAGRAGLGEAGESILIAQSKDN 659

  Fly   361 L----ELLAAIEEEINTKLTEHPIDQRMVERIFMQ--------VNVT--RRESEMQLDNNDFDER 411
            |    .|.:.:::.:::      :||.  |.:.:|        :|:.  ||:....:::.....:
  Fly   660 LLVGQMLFSPMDKALSS------LDQN--EAVGLQSLILSVVGLNLAECRRDLNRLVNSTLLSVQ 716

  Fly   412 AQNYRRKTWIMEGKDPDQMEALYRKKQKDKLREIRRKRKLQHAEPAASEEGKALLQDERFKSVDS 476
            |::               :|....:.....|||:.:.:.||.|||.|..:   :...:...|.|.
  Fly   717 AKS---------------LEVAVNEIVLRILREMFKNKVLQLAEPQAKSK---INSSDIITSQDV 763

  Fly   477 ARFEKKGKGRSRATQEDTPTKPLKRLNKEKPVAQKGRADVKKDKA 521
            ::..:....|.....:.||.| |..:.:   .|.|...|.|:..|
  Fly   764 SQANRPAGDRRLLIGQSTPFK-LTNIGR---AAFKAGIDYKRANA 804

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Dbp45ANP_476927.1 SrmB 8..490 CDD:223587 115/597 (19%)
DEADc 9..197 CDD:238167 55/260 (21%)
Helicase_C 239..346 CDD:278689 22/118 (19%)
mus301NP_648178.1 BRR2 247..998 CDD:224125 123/626 (20%)
DEXHc_POLQ-like 247..449 CDD:350784 51/232 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24031
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

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