DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Dbp45A and CG5800

DIOPT Version :9

Sequence 1:NP_476927.1 Gene:Dbp45A / 35917 FlyBaseID:FBgn0010220 Length:521 Species:Drosophila melanogaster
Sequence 2:NP_573230.1 Gene:CG5800 / 32742 FlyBaseID:FBgn0030855 Length:826 Species:Drosophila melanogaster


Alignment Length:553 Identity:137/553 - (24%)
Similarity:243/553 - (43%) Gaps:74/553 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 TPIQQKCIPAILAGQDCIGAAKTGSGKTFAFALPILERLSEEPVSHF----ALVLTPTHELAYQI 91
            |.:|:..|...|.|:|.:|||.||||||.||.:|:||.|.....|..    |::::||.||||||
  Fly    96 TQVQRDSIGPALQGKDVLGAAITGSGKTLAFLIPVLEHLFMNKWSRTDGVGAIIISPTRELAYQI 160

  Fly    92 SEQFLVAGQAMGVRVCVVSGGTDQMVESQKLMQRPHIVVAMPGRLADHLTGCDTFSFDNLKYLVV 156
            .|.....|:.......::.||.:...|..: |.:.:|::..||||..|:.....|:...::.||:
  Fly   161 FETLKKVGKHHDFSAGLIIGGKNLKFERTR-MDQCNILICTPGRLLQHMDENPLFNTSTMEMLVL 224

  Fly   157 DEADRMLNGDFDESLSIIERCLPKTRQNLFFSATMKDFIKESSIFPIASDCF------------- 208
            |||||.|:..|.::|:.|....|..||.|.||||..:.:::.:...:....:             
  Fly   225 DEADRCLDMGFQKTLNSIIENFPPVRQTLLFSATQTNTVQDLARLNLKDPVYVGYGGATPREEPS 289

  Fly   209 ----EWSQDSDVATVETLDQRYLLCADYDRDMVLIEALRKYREENENANVMIFTNTKKYCQLLSM 269
                :....:.:|..|.|.|.|::....|:..:|...::.:.::    .:::|..:.|..:.|..
  Fly   290 ASTKKTPNTAVLAVPELLQQSYVVLNLEDKITMLWSFIKNHLKQ----KIIVFVASCKQAKYLYE 350

  Fly   270 TLKNMEIDN--VCLHGFMRQKERVAALSRFKSNQIRTLIATDVAARGLDIPSVELVMNHMLPRTP 332
            ....:...:  :.|:|.:.|..|:|....|.......:.:||||:||||.|:|..|:....|...
  Fly   351 IFCKLRPGSPLLALYGTLHQDRRIAIYEDFLRKSHVVMFSTDVASRGLDFPAVNWVVQLDCPEDV 415

  Fly   333 KEYIHRVGRTARAGRKGMSISIFRFPRDLELLAAIEEEINTK---------------------LT 376
            .:||||.||:||...:|..:.:.....:..:::|::|::|..                     |.
  Fly   416 SQYIHRAGRSARNKTRGECLLVLTPSEEEYMISALKEQLNIDIRCVQIDPKKLFSPRVKIEAFLA 480

  Fly   377 EHPIDQRMVERIFM----QVNVTRRESEMQLDNNDFDERAQNYRRKTWIMEGKDPDQMEALYRKK 437
            :.|..:...:|.|:    .|.:.|.:....:.:.|.|..||:.   ...:..:.|...:.|:|:|
  Fly   481 QFPELRATAQRAFLSYIKSVFLMRNKRLFNVFSLDLDAFAQSL---GLAVTPRVPFLEKFLWRQK 542

  Fly   438 QKDKLRE-----------IRRKRKLQHAEPAASEEGKALLQDERFKSVDSARFEKKGKGRSRATQ 491
            |..:.:|           :.:..|.|..  ...:|.:....||.|..|.....:.:|:......:
  Fly   543 QLQQQKEQGDNAKSINPLLSKLTKQQSF--GGGDEDEENSDDEDFIKVKRKDHDVEGEPVKLDEE 605

  Fly   492 EDTPTK---PLKRLNKEKPV--AQKGRADVKKD 519
            :||..:   ||....:||.|  |...:..:||:
  Fly   606 DDTENEAEAPLVVPKREKLVTKASLAKKALKKN 638

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Dbp45ANP_476927.1 SrmB 8..490 CDD:223587 127/517 (25%)
DEADc 9..197 CDD:238167 63/169 (37%)
Helicase_C 239..346 CDD:278689 29/108 (27%)
CG5800NP_573230.1 PRK01297 2..471 CDD:234938 103/379 (27%)
DEADc 74..277 CDD:238167 63/181 (35%)
HELICc 311..437 CDD:238034 33/129 (26%)
DUF4217 474..530 CDD:290667 10/58 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45451437
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24031
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.940

Return to query results.
Submit another query.