DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dbp45A and Ddx49

DIOPT Version :9

Sequence 1:NP_476927.1 Gene:Dbp45A / 35917 FlyBaseID:FBgn0010220 Length:521 Species:Drosophila melanogaster
Sequence 2:NP_001108495.1 Gene:Ddx49 / 290660 RGDID:1311124 Length:480 Species:Rattus norvegicus


Alignment Length:499 Identity:232/499 - (46%)
Similarity:322/499 - (64%) Gaps:34/499 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 FQILGLRPWLVKQLTKLGLKGATPIQQKCIPAILAGQDCIGAAKTGSGKTFAFALPILERLSEEP 73
            |..|.|..|||:|..:||||..||:|..||||||.|:||:|.||||||||.||.||||::|||:|
  Rat     4 FAELRLSSWLVEQCRQLGLKQPTPVQLGCIPAILEGRDCLGCAKTGSGKTAAFVLPILQKLSEDP 68

  Fly    74 VSHFALVLTPTHELAYQISEQFLVAGQAMGVRVCVVSGGTDQMVESQKLMQRPHIVVAMPGRLAD 138
            ...|.||||||.||||||:|||.|.|:.:|::.|::.||.|.:.::.:|.::||:|:|.||||||
  Rat    69 YGIFCLVLTPTRELAYQIAEQFRVLGKPLGLKDCIIVGGMDMVTQALELSRKPHVVIATPGRLAD 133

  Fly   139 HLTGCDTFSFDNLKYLVVDEADRMLN---GDFDESLSIIERCLPKTRQNLFFSATMKDFIKESSI 200
            ||...:||:...:::||:|||||:|.   .||...|..|...:|..||.|.||||:.|.:||  :
  Rat   134 HLRSSNTFNMKKIRFLVLDEADRLLEQGCTDFTADLETILSAVPARRQTLLFSATLTDTLKE--L 196

  Fly   201 FPIASD-CFEWSQDSDVATVETLDQRYLLCADYDRDMVLIEALRKYREENENANVMIFTNTKKYC 264
            ..:|:: .|.|...:.|..||.|||||||..:..:|..|:..::.::::.|:.:::|||||.|.|
  Rat   197 QGLATNQPFFWEAQATVRMVEQLDQRYLLVPEKVKDAYLVHLVQTFQDQLEDCSIIIFTNTCKTC 261

  Fly   265 QLLSMTLKNMEIDNVCLHGFMRQKERVAALSRFKSNQIRTLIATDVAARGLDIPSVELVMNHMLP 329
            |:|.|.|:......|.||..|:||||.|||:||||:..|.|||||||:||||||:|::|:||..|
  Rat   262 QILCMMLRKFNFPTVALHSMMKQKERFAALARFKSSTYRILIATDVASRGLDIPTVQVVINHNTP 326

  Fly   330 RTPKEYIHRVGRTARAGRKGMSISIFRFPRDLELLAAIEEEINTKLTEHPIDQRMVERIFMQVNV 394
            ..||.|||||||||||||:|.:|::.. ..|:.||.||||||..:|.|..:::..|.:|..||||
  Rat   327 GLPKIYIHRVGRTARAGRQGQAITLVT-QYDIHLLHAIEEEIKQQLAELAVEEAQVLQILTQVNV 390

  Fly   395 TRRESEMQLDNNDFDERAQNYRRKTWIMEGKDPDQMEALYRKKQKDKLREIRRKRKLQHAEPAAS 459
            .|||.|::|:.:.|||:.:..:||..|:|||||| :||    |:|.:|.:|::            
  Rat   391 VRRECEIKLEASHFDEKKEINKRKQMILEGKDPD-LEA----KRKAELAKIKQ------------ 438

  Fly   460 EEGKALLQDERFKS--VDSARFEKKGK-GRSRATQEDTPTKPLK 500
                   |:.|||.  ..:.|.:|.|. ||........|.:|.:
  Rat   439 -------QNRRFKEKVEQTLRQQKAGSTGRRSRPPRPRPQEPAR 475

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Dbp45ANP_476927.1 SrmB 8..490 CDD:223587 230/487 (47%)
DEADc 9..197 CDD:238167 101/190 (53%)
Helicase_C 239..346 CDD:278689 58/106 (55%)
Ddx49NP_001108495.1 PTZ00424 4..382 CDD:185609 192/380 (51%)
DEADc 4..206 CDD:238167 104/203 (51%)
HELICc 218..351 CDD:238034 72/132 (55%)
DUF2317 <363..454 CDD:302887 41/114 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166353777
Domainoid 1 1.000 125 1.000 Domainoid score I5343
eggNOG 1 0.900 - - E2759_KOG0340
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H41308
Inparanoid 1 1.050 418 1.000 Inparanoid score I1749
OMA 1 1.010 - - QHG53695
OrthoDB 1 1.010 - - D314577at33208
OrthoFinder 1 1.000 - - FOG0001029
OrthoInspector 1 1.000 - - oto97288
orthoMCL 1 0.900 - - OOG6_102828
Panther 1 1.100 - - LDO PTHR24031
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X3550
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1514.770

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