DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dbp45A and vas

DIOPT Version :9

Sequence 1:NP_476927.1 Gene:Dbp45A / 35917 FlyBaseID:FBgn0010220 Length:521 Species:Drosophila melanogaster
Sequence 2:NP_001260458.1 Gene:vas / 26067080 FlyBaseID:FBgn0283442 Length:661 Species:Drosophila melanogaster


Alignment Length:380 Identity:127/380 - (33%)
Similarity:197/380 - (51%) Gaps:46/380 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 FQILGLRPWLVKQLTKLGLKGATPIQQKCIPAILAGQDCIGAAKTGSGKTFAFALPILERLSEEP 73
            |....||..::..:.|.|.|..||||:..||.|.:|:|.:..|:||||||.||.||||.:|.|:|
  Fly   247 FTSADLRDIIIDNVNKSGYKIPTPIQKCSIPVISSGRDLMACAQTGSGKTAAFLLPILSKLLEDP 311

  Fly    74 VSH-------FALVLTPTHELAYQISEQFLVAGQAMGVRVCVVSGGTDQMVESQKLMQRPHIVVA 131
              |       ..::::||.|||.||..:.........:::.:|.|||....:::.:.:..|:|:|
  Fly   312 --HELELGRPQVVIVSPTRELAIQIFNEARKFAFESYLKIGIVYGGTSFRHQNECITRGCHVVIA 374

  Fly   132 MPGRLADHLTGCDTF-SFDNLKYLVVDEADRMLNGDFDESLSII--ERCLPKTRQNLFFSATMK- 192
            .||||.|.:.  .|| :|::.:::|:|||||||:..|.|.:..|  ...:....|.|.||||.. 
  Fly   375 TPGRLLDFVD--RTFITFEDTRFVVLDEADRMLDMGFSEDMRRIMTHVTMRPEHQTLMFSATFPE 437

  Fly   193 -------DFIKE---SSIFPIASDCFEWSQDSDV-ATVETLDQRYLLCADYDRDMVLIEALRKYR 246
                   :|:|.   .:|..:...|      ||| .|:..:::       |.:...|||.|    
  Fly   438 EIQRMAGEFLKNYVFVAIGIVGGAC------SDVKQTIYEVNK-------YAKRSKLIEIL---- 485

  Fly   247 EENENAN-VMIFTNTKKYCQLLSMTLKNMEIDNVCLHGFMRQKERVAALSRFKSNQIRTLIATDV 310
              :|.|: .::|..||:....|:..|...|.....:||...|.:|..||..||:..::.||||.|
  Fly   486 --SEQADGTIVFVETKRGADFLASFLSEKEFPTTSIHGDRLQSQREQALRDFKNGSMKVLIATSV 548

  Fly   311 AARGLDIPSVELVMNHMLPRTPKEYIHRVGRTARAGRKGMSISIFRFPRDLELLA 365
            |:|||||.:::.|:|:.:|....:|:||:|||.|.|..|.:.|.|...:|..:.|
  Fly   549 ASRGLDIKNIKHVINYDMPSKIDDYVHRIGRTGRVGNNGRATSFFDPEKDRAIAA 603

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Dbp45ANP_476927.1 SrmB 8..490 CDD:223587 127/380 (33%)
DEADc 9..197 CDD:238167 72/205 (35%)
Helicase_C 239..346 CDD:278689 40/107 (37%)
vasNP_001260458.1 DEADc 247..454 CDD:238167 73/210 (35%)
DEXDc 260..467 CDD:214692 75/216 (35%)
Helicase_C 475..584 CDD:278689 42/114 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45451598
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.840

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