DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dbp45A and H20J04.4

DIOPT Version :9

Sequence 1:NP_476927.1 Gene:Dbp45A / 35917 FlyBaseID:FBgn0010220 Length:521 Species:Drosophila melanogaster
Sequence 2:NP_001040789.1 Gene:H20J04.4 / 186756 WormBaseID:WBGene00019219 Length:561 Species:Caenorhabditis elegans


Alignment Length:481 Identity:192/481 - (39%)
Similarity:297/481 - (61%) Gaps:20/481 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 FQILGLRPWLVKQLTKLGLKGATPIQQKCIPAILAGQDCIGAAKTGSGKTFAFALPILERLSEEP 73
            |..||:..|:.:||..:.:|.|||:|..|||.||.|.|.:|.|:||:|||.|||:|||::||.:|
 Worm    91 FSQLGVCSWITQQLQTMQIKTATPVQAACIPKILEGSDILGCARTGTGKTLAFAIPILQKLSVDP 155

  Fly    74 VSHFALVLTPTHELAYQISEQFLVAGQAMGVRVCVVSGGTDQMVESQKLMQRPHIVVAMPGRLAD 138
            ...:||:||||.|||:||:|||...|:.:.::..|:.||...:.::::|.:|||:|||.||||||
 Worm   156 YGIYALILTPTRELAFQIAEQFTALGKPITLKCSVIVGGRSLIHQARELSERPHVVVATPGRLAD 220

  Fly   139 HL-TGCDTFS--FDNLKYLVVDEADRMLNGDFDESLSIIERCLPKTRQNLFFSATMKDFI----K 196
            .: :..||.:  |..:::.|:|||||||.|.:::.|..|...:.:.||.|..|||:.:.|    :
 Worm   221 LIESDPDTIAKVFKKIQFFVLDEADRMLEGQYNDQLKPIFESISEKRQTLLLSATITNNINMLHR 285

  Fly   197 ESSIFPIASDCFEWSQDSDVATVETLDQRYLLCADYDRDMVLIEALRKYREENENANVMIFTNTK 261
            .|:..|.   .||.....|.:||:.|:|:|::|....:|..|:..::.|.|:|..::||||..|.
 Worm   286 VSTRKPY---FFEDKGKDDESTVDRLEQKYVVCPVAVKDAYLVYVVKNYSEKNPKSSVMIFAQTC 347

  Fly   262 KYCQLLSMTLKNMEIDNVCLHGFMRQKERVAALSRFKSNQIRTLIATDVAARGLDIPSVELVMNH 326
            :.||.|:...:.:......||..:.||:|:||||.|:|..::.:|.||||:||||||.|:||:||
 Worm   348 RECQALAYMFEGLGFRVGSLHSQIPQKQRLAALSAFRSKTLQVIICTDVASRGLDIPHVDLVVNH 412

  Fly   327 MLPRTPKEYIHRVGRTARAGRKGMSISIFRFPRDLELLAAIEEEINTKLTEHPIDQRMVERIFMQ 391
            .:|:.||.|||||||:|||||.|.::| |....|:|||.|:|:.|..||.|..:..:.|.:...|
 Worm   413 NVPQCPKTYIHRVGRSARAGRFGSALS-FVTQYDVELLQAVEQVIGKKLDELKVSPKHVTKYVTQ 476

  Fly   392 VNVTRRESEMQLDNNDFDERAQNYRRKTWIMEGKDPDQMEALYRKKQKDKLREIRRKRKLQHAEP 456
            |.|.::|:|::|:|..|.|:.:..|||..:|.|.|.|         :.|:..|..|.|::.:::.
 Worm   477 VLVAKKEAELKLENQKFGEKKEINRRKELLMSGMDED---------EADRHLEEMRTRRMTNSKR 532

  Fly   457 AASEEGKALLQDERFKSVDSARFEKK 482
            ...:....|.:.:||:...:|:..||
 Worm   533 KLEKISGQLDKRDRFQKKLAAKKVKK 558

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Dbp45ANP_476927.1 SrmB 8..490 CDD:223587 192/481 (40%)
DEADc 9..197 CDD:238167 86/194 (44%)
Helicase_C 239..346 CDD:278689 50/106 (47%)
H20J04.4NP_001040789.1 SrmB 69..546 CDD:223587 187/467 (40%)
DEADc 91..295 CDD:238167 88/206 (43%)
Helicase_C 333..432 CDD:278689 49/98 (50%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160167246
Domainoid 1 1.000 108 1.000 Domainoid score I4034
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H41308
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S721
OMA 1 1.010 - - QHG53695
OrthoDB 1 1.010 - - D314577at33208
OrthoFinder 1 1.000 - - FOG0001029
OrthoInspector 1 1.000 - - oto18542
orthoMCL 1 0.900 - - OOG6_102828
Panther 1 1.100 - - LDO PTHR24031
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2082
SonicParanoid 1 1.000 - - X3550
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1312.840

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