Protein Alignment CNT1 and nupC

DIOPT Version :10

• Sequence 1: NP_610447.2
• Gene: CNT1 / 35915
• FlyBaseID: FBgn0033371
• Length: 590
• Species: Drosophila melanogaster
• Sequence 2: NP_416894.1
• Gene: nupC / 946895
• ECOCYCID: EG11971
• Length: 400
• Species: Escherichia coli
• Alignment Length: 395
• Identity: 94/395 - (23%)
• Similarity: 186/395 - (47%)
• Gaps: 16/395 - (4%)

  Fly   194 LIGFAVSKHHLQVPWRIVTHGLLGQLLLGILCLRLPFGRSIFQCLGDKVTIFLNYAQHGARFVYG 258
            ::...||....::..|.|...|:.::||....|....|....:...:.....|.:|..|..||:|
E. coli    16 ILALLVSSDRKKIRIRYVIQLLVIEVLLAWFFLNSDVGLGFVKGFSEMFEKLLGFANEGTNFVFG 80

  Fly   259 DRICDEYVFAF-AILAVVFFFSVITSIMYYLGWMQFILNGFGFLLQAMVGTTVCESVNAAGNVFL 322
            ........|.| .:|..:.|.|.:..|:.::..:..|:...||||..:.|....||.||..::.|
E. coli    81 SMNDQGLAFFFLKVLCPIVFISALIGILQHIRVLPVIIRAIGFLLSKVNGMGKLESFNAVSSLIL 145

  Fly   323 SMTESPLVIRPYIEILTVSELHAICTSGYATVAGTVLGAYVSFGASASFLIAASVMAAPGSLAFA 387
            ..:|:.:..:..:..::.:.::.:..:..:||:.:::|||::. ....:::||.|:....:....
E. coli   146 GQSENFIAYKDILGKISRNRMYTMAATAMSTVSMSIVGAYMTM-LEPKYVVAALVLNMFSTFIVL 209

  Fly   388 KLFYPETEESLTRSDNIKLESSTD-TSILDAAASGAAAALLIVLGIVSNIIAFLAIVFFLDA--- 448
            .|..|...::  ..:||::.:..: .|..:.......|...:.:.:.:.:|.|:|::..|:|
E. coli   210 SLINPYRVDA--SEENIQMSNLHEGQSFFEMLGEYILAGFKVAIIVAAMLIGFIALIAALNALFA 272

  Fly   449 -VTEWIFELIGLHNITLLYILSQIFIPIVFVMGVPWHDCQAIGLVVAQKSFINEFVAYRNLGILV 512
             ||.|..     ::|:...||..||.||.:|||||..:...:|.::|.|...|||||..:|..:.
E. coli   273 TVTGWFG-----YSISFQGILGYIFYPIAWVMGVPSSEALQVGSIMATKLVSNEFVAMMDLQKIA 332

  Fly   513 SDKKVDPRSAAIATFALCGFANPGSLGIVIASLSAMAPSRRSDITRVAFRSYFAGSFVSFTSASL 577
            |  .:.||:..|.:..|..|||..|:||:..::..:...:.:.::|...:..:..:.||..|||:
E. coli   333 S--TLSPRAEGIISVFLVSFANFSSIGIIAGAVKGLNEEQGNVVSRFGLKLVYGSTLVSVLSASI 395

  Fly   578 AGILI 582
            |.:::
E. coli   396 AALVL 400

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CNT1	NP_610447.2	NupC	184..582	CDD:441575	94/393 (24%)
nupC	NP_416894.1	NupC	4..400	CDD:441575	94/393 (24%)