DRSC/TRiP Functional Genomics Resources

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Protein Alignment CNT1 and psuT

DIOPT Version :10

Sequence 1:NP_610447.2 Gene:CNT1 / 35915 FlyBaseID:FBgn0033371 Length:590 Species:Drosophila melanogaster
Sequence 2:NP_416669.1 Gene:psuT / 946671 ECOCYCID:EG12032 Length:416 Species:Escherichia coli


Alignment Length:407 Identity:126/407 - (30%)
Similarity:220/407 - (54%) Gaps:10/407 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly   186 LLGPVCFVLIGFAVSKHHLQVPWRIVTHGLLGQLLLGILCLRLPFGRSIFQCLGDKVTIFLNYAQ 250
            ::|.|..:.|.|.:|.:...:..|.|...||.|:.:|.:.|..|.|:...:.....|...::|:.
E. coli     7 VVGMVVLLAIAFLLSVNKKSISLRTVGAALLLQIAIGGIMLYFPPGKWAVEQAALGVHKVMSYSD 71

  Fly   251 HGARFVYGDRICDE---------YVFAFAILAVVFFFSVITSIMYYLGWMQFILNGFGFLLQAMV 306
            .|:.|::|..:..:         ::|||.:|..:.|.:.:.|::||:|.|..::...|.:.|..:
E. coli    72 AGSAFIFGSLVGPKMDVLFDGAGFIFAFRVLPAIIFVTALISLLYYIGVMGLLIRILGSIFQKAL 136

  Fly   307 GTTVCESVNAAGNVFLSMTESPLVIRPYIEILTVSELHAICTSGYATVAGTVLGAYVSFGASASF 371
            ..:..||..|...:||...|.|.:::|:|:.:..:||.....||.|::||:::..|...|....:
E. coli   137 NISKIESFVAVTTIFLGQNEIPAIVKPFIDRMNRNELFTAICSGMASIAGSMMIGYAGMGVPIDY 201

  Fly   372 LIAASVMAAPGSLAFAKLFYPETEESLTRSDNIKLESSTDTSILDAAASGAAAALLIVLGIVSNI 436
            |:|||:||.||.:.||::..|.||.|....:|:....:...|.::||||||...|.|..|:.:.:
E. coli   202 LLAASLMAIPGGILFARILSPATEPSQVTFENLSFSETPPKSFIEAAASGAMTGLKIAAGVATVV 266

  Fly   437 IAFLAIVFFLDAVTEWIFELIGLHNITLLYILSQIFIPIVFVMGVPWHDCQAIGLVVAQKSFINE 501
            :||:||:..::.:...|....|..|.:|..|...:..|:.::|||.|.|....|.::.||..|||
E. coli   267 MAFVAIIALINGIIGGIGGWFGFANASLESIFGYVLAPLAWIMGVDWSDANLAGSLIGQKLAINE 331

  Fly   502 FVAYRNLG-ILVSDKKVDPRSAAIATFALCGFANPGSLGIVIASLSAMAPSRRSDITRVAFRSYF 565
            ||||.:.. .|.:...::.::.||.:||||||||.||:|:|:.:.||::|.|..:|.::..|:..
E. coli   332 FVAYLSFSPYLQTGGTLEVKTIAIISFALCGFANFGSIGVVVGAFSAISPKRAPEIAQLGLRALA 396

  Fly   566 AGSFVSFTSASLAGILI 582
            |.:..:..||::||..|
E. coli   397 AATLSNLMSATIAGFFI 413

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CNT1NP_610447.2 NupC 184..582 CDD:441575 125/405 (31%)
psuTNP_416669.1 NupC 1..414 CDD:441575 126/407 (31%)

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