DRSC/TRiP Functional Genomics Resources

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Protein Alignment CNT1 and Slc28a2

DIOPT Version :10

Sequence 1:NP_610447.2 Gene:CNT1 / 35915 FlyBaseID:FBgn0033371 Length:590 Species:Drosophila melanogaster
Sequence 2:NP_113852.2 Gene:Slc28a2 / 60423 RGDID:61840 Length:659 Species:Rattus norvegicus


Alignment Length:497 Identity:202/497 - (40%)
Similarity:309/497 - (62%) Gaps:22/497 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    99 CQINWCHGYGFLIVLFILFYILWLYYWVFKPFVGIKLYNNYLEPVIDKWIAFSRQWIVSGVMLAI 163
            |.:|:.......::..::.:||..::  .|.|...|.. ..|:|:.:..:   |.|:....|.|.
  Rat    98 CILNFRRAQALFVITCLVIFILACHF--LKKFFAKKSI-RCLKPLKNTRL---RLWLKRVFMGAA 156

  Fly   164 VLAVVVAYLGFECRNDAYKAIGLLGPVCFVLIGFAVSKHHLQVPWRIVTHGLLGQLLLGILCLRL 228
            |:.::: :|..:......:.|...|...|:||.||.||||..|.||.|..||..|.:.|||.:|.
  Rat   157 VVGLIL-WLALDTAQRPEQLISFAGICMFILILFACSKHHSAVSWRTVFWGLGLQFVFGILVIRT 220

  Fly   229 PFGRSIFQCLGDKVTIFLNYAQHGARFVYGDRICDEYVFAFAILAVVFFFSVITSIMYYLGWMQF 293
            ..|.:.||.|||::.|||.|...|:.||:||.:. :.||||..|.::.||..:.||:||||.:|:
  Rat   221 EPGFNAFQWLGDQIQIFLAYTVEGSSFVFGDTLV-QSVFAFQSLPIIIFFGCVMSILYYLGLVQW 284

  Fly   294 ILNGFGFLLQAMVGTTVCESVNAAGNVFLSMTESPLVIRPYIEILTVSELHAICTSGYATVAGTV 358
            ::....:.||..:|||..|::..|||:|:.|||:||:||||:..:|:||:||:.|.|:||:||||
  Rat   285 VIQKIAWFLQITMGTTAAETLAVAGNIFVGMTEAPLLIRPYLADMTLSEIHAVMTGGFATIAGTV 349

  Fly   359 LGAYVSFGASASFLIAASVMAAPGSLAFAKLFYPETEESLTRS-DNIKLESSTDTSILDAAASGA 422
            |||::|||..||.||:|||||||.:||.:||.|||.|||..:| :.:||....:.:||:||::||
  Rat   350 LGAFISFGIDASSLISASVMAAPCALALSKLVYPEVEESKFKSKEGVKLPRGEERNILEAASNGA 414

  Fly   423 AAALLIVLGIVSNIIAFLAIVFFLDAVTEWIFELIGLHNITLLYILSQIFIPIVFVMGVPWHDCQ 487
            ..|:.:|..:.:|:|||||::.|:::...|:.|::.:|.:|...|.|.:..|:||:|||.|.||.
  Rat   415 TDAIGLVANVAANLIAFLAVLAFINSTLSWLGEMVDIHGLTFQVICSYVLRPMVFMMGVQWADCP 479

  Fly   488 AIGLVVAQKSFINEFVAYRNL---------GI---LVSDKK-VDPRSAAIATFALCGFANPGSLG 539
            .:..:|..|.||||||||:.|         |:   :..:|: :..::..||||:||||||..|:|
  Rat   480 LVAEIVGVKFFINEFVAYQQLSQYKNKRLSGVEEWINGEKQWISVKAEIIATFSLCGFANLTSIG 544

  Fly   540 IVIASLSAMAPSRRSDITRVAFRSYFAGSFVSFTSASLAGIL 581
            |.:..|::|.|.|:||:.::..|:.|.|:.|||.||.:||||
  Rat   545 ITLGGLTSMVPQRKSDLCKLVVRALFTGACVSFISACMAGIL 586

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CNT1NP_610447.2 NupC 184..582 CDD:441575 187/412 (45%)
Slc28a2NP_113852.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..22
nupC 175..586 CDD:273278 185/411 (45%)
Blue background indicates that the domain is not in the aligned region.

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