Protein Alignment CNT1 and CNT2

DIOPT Version :10

• Sequence 1: NP_610447.2
• Gene: CNT1 / 35915
• FlyBaseID: FBgn0033371
• Length: 590
• Species: Drosophila melanogaster
• Sequence 2: NP_610446.1
• Gene: CNT2 / 35914
• FlyBaseID: FBgn0025709
• Length: 603
• Species: Drosophila melanogaster
• Alignment Length: 581
• Identity: 288/581 - (49%)
• Similarity: 384/581 - (66%)
• Gaps: 43/581 - (7%)

  Fly     6 EGEQEEKPPPSRAKRITYLVLHVLLHIIFISYFTAATIIFIFYDKDSKEC-WPNRGSEATTESID 69
            :|..|:.|..:|..||:   ::||||:..:.||:.||  :.::|..:.|| |
  Fly    44 KGYFEKNPKVARLVRIS---IYVLLHLCVVGYFSYAT--YHYHDITNYECYW------------- 90

  Fly    70 NSTEDDDDDDYDTEETSEKPVPEVKPKLLCQINWCHGYGFLIVLFILFYILWLYYWVFKPFVGIK 134
                                    |...||.||:|.|||.|::|....|:...||:||||.||..
  Fly    91 ------------------------KDNPLCGINFCTGYGMLLLLLGFIYLGLFYYYVFKPMVGHS 131

  Fly   135 LYNNYLEPVIDKWIAFSRQWIVSGVMLAIVLAVVVAYLGFECRNDAYKAIGLLGPVCFVLIGFAV 199
            |:.||::|...||..|||..:||...:|::||::..::.||||::..|.:.|:.|..|:|.|:..
  Fly   132 LHRNYIKPFSKKWHNFSRTRVVSLASIALLLALLAIFVYFECRDETQKLVSLVAPCFFILCGYVF 196

  Fly   200 SKHHLQVPWRIVTHGLLGQLLLGILCLRLPFGRSIFQCLGDKVTIFLNYAQHGARFVYGDRICDE 264
            |.:...:.||||..|:..|.||||.|:|...||.||:|||:||..||.||..||.||:||.:.:.
  Fly   197 STNRRAINWRIVITGITCQFLLGIFCIRWEVGRKIFECLGNKVATFLGYATDGAEFVFGDFLVNN 261

  Fly   265 YVFAFAILAVVFFFSVITSIMYYLGWMQFILNGFGFLLQAMVGTTVCESVNAAGNVFLSMTESPL 329
            .|||||||.|:||||...||:||:|.||:::...|::||.::||||||||.||.|:||.|:||||
  Fly   262 NVFAFAILPVIFFFSFFISILYYMGTMQWVVIKLGWILQQILGTTVCESVTAAANIFLGMSESPL 326

  Fly   330 VIRPYIEILTVSELHAICTSGYATVAGTVLGAYVSFGASASFLIAASVMAAPGSLAFAKLFYPET 394
            :|||||..||.||:|:|..||:|||:||||.||:||||||:.||.:||||||.:||.:||:.|||
  Fly   327 LIRPYINKLTKSEIHSIMVSGFATVSGTVLAAYLSFGASAAHLITSSVMAAPATLAISKLYMPET 391

  Fly   395 EESLTRSDNIKLESSTDTSILDAAASGAAAALLIVLGIVSNIIAFLAIVFFLDAVTEWIFELIGL 459
            |||.|.||:|:||.|.|:|:||||:|||:.|:.|||||::||:||:|.:.||:.:..|...|:||
  Fly   392 EESQTSSDSIELEKSQDSSLLDAASSGASNAVPIVLGIIANIVAFVAFIAFLNGLVSWFGYLVGL 456

  Fly   460 HNITLLYILSQIFIPIVFVMGVPWHDCQAIGLVVAQKSFINEFVAYRNLGILVSDKKVDPRSAAI 524
            ..|...:|.|::|||:|:.||||..||..|..|||.|:.|||||||..||..:.:..:..|||.|
  Fly   457 EQIDFEWIFSKLFIPLVWAMGVPKEDCDIIAKVVATKTIINEFVAYERLGQYIENNDITARSAGI 521

  Fly   525 ATFALCGFANPGSLGIVIASLSAMAPSRRSDITRVAFRSYFAGSFVSFTSASLAGILIQNE 585
            ||||:||||||.||||:|.|||||||.|||.||.||||::..||.|.|.|||.||||||.:
  Fly   522 ATFAICGFANPSSLGILIGSLSAMAPHRRSTITAVAFRAFVVGSIVCFVSASFAGILIQED 582

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CNT1	NP_610447.2	NupC	184..582	CDD:441575	228/397 (57%)
CNT2	NP_610446.1	NupC	180..579	CDD:441575	228/398 (57%)