DRSC/TRiP Functional Genomics Resources

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Protein Alignment CNT2 and Slc28a1

DIOPT Version :9

Sequence 1:NP_610446.1 Gene:CNT2 / 35914 FlyBaseID:FBgn0025709 Length:603 Species:Drosophila melanogaster
Sequence 2:NP_001004184.2 Gene:Slc28a1 / 434203 MGIID:3605073 Length:648 Species:Mus musculus


Alignment Length:491 Identity:194/491 - (39%)
Similarity:305/491 - (62%) Gaps:28/491 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly   106 MLLLLLGFIYLGLFYYYVFKPMVGHSLHRNYIKPFSKKWHNFSRTRVVSL---ASIALLLAL-LA 166
            :.|.::..:.|....|.:.|.::|..|         ||...|.....:||   ..:||...| :.
Mouse   110 LALFVITCVVLVFLAYNLLKRLLGSKL---------KKCVKFQGHSCLSLWLKRGLALAAGLGVI 165

  Fly   167 IFVYFECRDETQKLVSLVAPCFFILCGYVFSTNRRAINWRIVITGITCQFLLGIFCIRWEVGRKI 231
            :::..:.....::|||....|.|::..:..|.:.||::||.|..|:..||:||:|.||.|.|...
Mouse   166 LWLSLDTAQRPEQLVSFAGICVFLVLLFAGSKHHRAVSWRAVSWGLGLQFVLGLFVIRTEPGFVA 230

  Fly   232 FECLGNKVATFLGYATDGAEFVFGDFLVNNNVFAFAILPVIFFFSFFISILYYMGTMQWVVIKLG 296
            |:.||:::..||.|...|:.||||:.|| .:||||.:||:|.|||..:|:|||:|.||||::|:.
Mouse   231 FQWLGDQIRVFLSYTEAGSSFVFGEALV-KDVFAFQVLPIIVFFSCVMSVLYYLGLMQWVILKIA 294

  Fly   297 WILQQILGTTVCESVTAAANIFLGMSESPLLIRPYINKLTKSEIHSIMVSGFATVSGTVLAAYLS 361
            |::|..:||:..|:::.|.|||:..:|:|||||||:..:|.||:|.:|..|:||::|::|.||:|
Mouse   295 WLMQVTMGTSATETLSVAGNIFVSQTEAPLLIRPYLADMTLSEVHVVMTGGYATIAGSLLGAYIS 359

  Fly   362 FGASAAHLITSSVMAAPATLAISKLYMPETEESQ-TSSDSIELEKSQDSSLLDAASSGASNAVPI 425
            ||..|:.||.:||||||..||:|||..||.|||: .|.:.::|......:|::|||:||:.:|.:
Mouse   360 FGIDASSLIAASVMAAPCALALSKLVYPEVEESKFRSEEGVKLTYGDAQNLVEAASAGAAISVKV 424

  Fly   426 VLGIIANIVAFVAFIAFLNGLVSWFGYLVGLEQIDFEWIFSKLFIPLVWAMGVPKEDCDIIAKVV 490
            |..|.||::||:|.:||:|..:||.|.:|.::.:.|:.|.|.:..|:.:.|||..|||.::|:::
Mouse   425 VANIAANLIAFLAVLAFINAALSWLGDMVDIQGLSFQLICSYVLRPVAFLMGVAWEDCPVVAELL 489

  Fly   491 ATKTIINEFVAYERLGQYIEN---------ND----ITARSAGIATFAICGFANPSSLGILIGSL 542
            ..|..:||||||:.|.||.:.         .|    |:.|:..:.|:|:|||||.||:||::|.|
Mouse   490 GIKLFLNEFVAYQELSQYKQRRLAGAEEWLGDKKQWISVRAEILTTYALCGFANFSSIGIMLGGL 554

  Fly   543 SAMAPHRRSTITAVAFRAFVVGSIVCFVSASFAGIL 578
            ::|.|.|||..:.:..||.:.|:.|..|:|..||||
Mouse   555 TSMVPQRRSDFSQIVLRALITGAFVSLVNACVAGIL 590

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CNT2NP_610446.1 nupC 180..578 CDD:273278 178/411 (43%)
Nucleos_tra2_N 187..254 CDD:280026 26/66 (39%)
Gate 268..363 CDD:284976 46/94 (49%)
Nucleos_tra2_C 368..578 CDD:284970 91/223 (41%)
Slc28a1NP_001004184.2 nupC 179..590 CDD:273278 178/411 (43%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167847400
Domainoid 1 1.000 190 1.000 Domainoid score I3256
eggNOG 1 0.900 - - E1_COG1972
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 376 1.000 Inparanoid score I2058
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG63093
OrthoDB 1 1.010 - - D251221at33208
OrthoFinder 1 1.000 - - FOG0001233
OrthoInspector 1 1.000 - - mtm8877
orthoMCL 1 0.900 - - OOG6_102197
Panther 1 1.100 - - O PTHR10590
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4851
SonicParanoid 1 1.000 - - X691
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1615.800

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