Protein Alignment CNT2 and CNT1

DIOPT Version :10

• Sequence 1: NP_610446.1
• Gene: CNT2 / 35914
• FlyBaseID: FBgn0025709
• Length: 603
• Species: Drosophila melanogaster
• Sequence 2: NP_610447.2
• Gene: CNT1 / 35915
• FlyBaseID: FBgn0033371
• Length: 590
• Species: Drosophila melanogaster
• Alignment Length: 581
• Identity: 288/581 - (49%)
• Similarity: 384/581 - (66%)
• Gaps: 43/581 - (7%)

  Fly    44 KGYFEKNPKVARLVRIS---IYVLLHLCVVGYFSYAT--YHYHDITNYECYW------------- 90
            :|..|:.|..:|..||:   ::||||:..:.||:.||  :.::|..:.|| |
  Fly     6 EGEQEEKPPPSRAKRITYLVLHVLLHIIFISYFTAATIIFIFYDKDSKEC-WPNRGSEATTESID 69

  Fly    91 ------------------------KDNPLCGINFCTGYGMLLLLLGFIYLGLFYYYVFKPMVGHS 131
                                    |...||.||:|.|||.|::|....|:...||:||||.||..
  Fly    70 NSTEDDDDDDYDTEETSEKPVPEVKPKLLCQINWCHGYGFLIVLFILFYILWLYYWVFKPFVGIK 134

  Fly   132 LHRNYIKPFSKKWHNFSRTRVVSLASIALLLALLAIFVYFECRDETQKLVSLVAPCFFILCGYVF 196
            |:.||::|...||..|||..:||...:|::||::..::.||||::..|.:.|:.|..|:|.|:..
  Fly   135 LYNNYLEPVIDKWIAFSRQWIVSGVMLAIVLAVVVAYLGFECRNDAYKAIGLLGPVCFVLIGFAV 199

  Fly   197 STNRRAINWRIVITGITCQFLLGIFCIRWEVGRKIFECLGNKVATFLGYATDGAEFVFGDFLVNN 261
            |.:...:.||||..|:..|.||||.|:|...||.||:|||:||..||.||..||.||:||.:.:.
  Fly   200 SKHHLQVPWRIVTHGLLGQLLLGILCLRLPFGRSIFQCLGDKVTIFLNYAQHGARFVYGDRICDE 264

  Fly   262 NVFAFAILPVIFFFSFFISILYYMGTMQWVVIKLGWILQQILGTTVCESVTAAANIFLGMSESPL 326
            .|||||||.|:||||...||:||:|.||:::...|::||.::||||||||.||.|:||.|:||||
  Fly   265 YVFAFAILAVVFFFSVITSIMYYLGWMQFILNGFGFLLQAMVGTTVCESVNAAGNVFLSMTESPL 329

  Fly   327 LIRPYINKLTKSEIHSIMVSGFATVSGTVLAAYLSFGASAAHLITSSVMAAPATLAISKLYMPET 391
            :|||||..||.||:|:|..||:|||:||||.||:||||||:.||.:||||||.:||.:||:.|||
  Fly   330 VIRPYIEILTVSELHAICTSGYATVAGTVLGAYVSFGASASFLIAASVMAAPGSLAFAKLFYPET 394

  Fly   392 EESQTSSDSIELEKSQDSSLLDAASSGASNAVPIVLGIIANIVAFVAFIAFLNGLVSWFGYLVGL 456
            |||.|.||:|:||.|.|:|:||||:|||:.|:.|||||::||:||:|.:.||:.:..|...|:||
  Fly   395 EESLTRSDNIKLESSTDTSILDAAASGAAAALLIVLGIVSNIIAFLAIVFFLDAVTEWIFELIGL 459

  Fly   457 EQIDFEWIFSKLFIPLVWAMGVPKEDCDIIAKVVATKTIINEFVAYERLGQYIENNDITARSAGI 521
            ..|...:|.|::|||:|:.||||..||..|..|||.|:.|||||||..||..:.:..:..|||.|
  Fly   460 HNITLLYILSQIFIPIVFVMGVPWHDCQAIGLVVAQKSFINEFVAYRNLGILVSDKKVDPRSAAI 524

  Fly   522 ATFAICGFANPSSLGILIGSLSAMAPHRRSTITAVAFRAFVVGSIVCFVSASFAGILIQED 582
            ||||:||||||.||||:|.|||||||.|||.||.||||::..||.|.|.|||.||||||.:
  Fly   525 ATFALCGFANPGSLGIVIASLSAMAPSRRSDITRVAFRSYFAGSFVSFTSASLAGILIQNE 585

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CNT2	NP_610446.1	NupC	180..579	CDD:441575	228/398 (57%)
CNT1	NP_610447.2	NupC	184..582	CDD:441575	228/397 (57%)