DRSC/TRiP Functional Genomics Resources

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Protein Alignment CNT2 and Slc28a3

DIOPT Version :9

Sequence 1:NP_610446.1 Gene:CNT2 / 35914 FlyBaseID:FBgn0025709 Length:603 Species:Drosophila melanogaster
Sequence 2:NP_071712.3 Gene:Slc28a3 / 114304 MGIID:2137361 Length:703 Species:Mus musculus


Alignment Length:621 Identity:220/621 - (35%)
Similarity:353/621 - (56%) Gaps:72/621 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 DHKELDIRDSEEFTEHPLDDTSEVANKKGYFEKN--------PKVARLVRISIYVLLHLCVVGYF 73
            |.:::.|.......:...:|.||..::||:.|:.        .|...::|.:|:.:|   :.|:.
Mouse    68 DDRQITIEQEPLGNKEDPEDDSEDEHQKGFLERKYDTICEFCRKHRVVLRSTIWAVL---LTGFL 129

  Fly    74 SYATYHYHDITNYECYWKDNPLCGINFCTGYGMLLLLLGFIYLGLFYYYVFKPMVGHSLHR--NY 136
            :...                ..|.|||.....:.::.|..|     ::.::..::.....|  ::
Mouse   130 ALVI----------------AACAINFHRALPLFVITLVTI-----FFVIWDHLMAKYEQRIDDF 173

  Fly   137 IKP---------FSKKWHNFSRTRVVSLASIALLLALLAIFVYFECRDETQKLVSLVAPCFFILC 192
            :.|         |..||..:|          :|:||::........:...|.|||......:::.
Mouse   174 LSPGRRLLDRHWFWLKWVVWS----------SLILAIILWLSLDTAKLGQQNLVSFGGLIMYLIL 228

  Fly   193 GYVFSTNRRAINWRIVITGITCQFLLGIFCIRWEVGRKIFECLGNKVATFLGYATDGAEFVFGDF 257
            .::||.:...:.||.|..||..|||||:..:|...|...|:.:|.:|.|||||...||.||||: 
Mouse   229 LFLFSKHPTRVYWRPVFWGIGLQFLLGLLILRTRPGFVAFDWMGRQVQTFLGYTDTGARFVFGE- 292

  Fly   258 LVNNNVFAFAILPVIFFFSFFISILYYMGTMQWVVIKLGWILQQILGTTVCESVTAAANIFLGMS 322
            ...::.|||.|||::.|||..:|:|||:|.|||::.|:||::...:|::..|||.||.|||:|.:
Mouse   293 KYTDHFFAFKILPIVVFFSTVMSMLYYLGLMQWIIRKVGWLMLVTMGSSPIESVVAAGNIFIGQT 357

  Fly   323 ESPLLIRPYINKLTKSEIHSIMVSGFATVSGTVLAAYLSFGASAAHLITSSVMAAPATLAISKLY 387
            |||||::||:..:||||:|:||.:||||::|:||.||:|||.|:.||:|:|||:|||.||::||:
Mouse   358 ESPLLVQPYLPHVTKSELHTIMTAGFATIAGSVLGAYISFGVSSTHLLTASVMSAPAALAVAKLF 422

  Fly   388 MPETEESQ-TSSDSIELEKSQDSSLLDAASSGASNAVPIVLGIIANIVAFVAFIAFLNGLVSWFG 451
            .||||:.: |...::::|.....:||:|||.|||:::|:|..|.||::||:|.::|:|..:||||
Mouse   423 WPETEKPKITLKSAMKMENGDSRNLLEAASQGASSSIPLVANIAANLIAFLALLSFVNSALSWFG 487

  Fly   452 YLVGLEQIDFEWIFSKLFIPLVWAMGVPKEDCDIIAKVVATKTIINEFVAYERLGQYIE------ 510
            .:....::.||.|.|.:|:|..:.|||..:|..::||::..||..||||||:.|.:.|.      
Mouse   488 SMFNYPELSFELICSYIFMPFSFMMGVDWQDSFMVAKLIGYKTFFNEFVAYDHLSKLINLRKAAG 552

  Fly   511 -------NNDITARSAGIATFAICGFANPSSLGILIGSLSAMAPHRRSTITAVAFRAFVVGSIVC 568
                   ...::.||..|||:|:|||||..||||:||.|:::||.|:..|.:.|.||.:.|:|.|
Mouse   553 PKFVNGVQQYMSIRSETIATYALCGFANFGSLGIVIGGLTSIAPSRKRDIASGAMRALIAGTIAC 617

  Fly   569 FVSASFAGILIQEDDERANYNRIFEKLGR--KNVTQ 602
            |::|..|||| .:.....|.:.:.|. ||  .|.|:
Mouse   618 FMTACIAGIL-SDTPVDINCHHVLEN-GRVLSNTTE 651

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CNT2NP_610446.1 nupC 180..578 CDD:273278 183/411 (45%)
Nucleos_tra2_N 187..254 CDD:280026 25/66 (38%)
Gate 268..363 CDD:284976 51/94 (54%)
Nucleos_tra2_C 368..578 CDD:284970 95/223 (43%)
Slc28a3NP_071712.3 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..93 5/24 (21%)
nupC 216..627 CDD:273278 183/411 (45%)
Nucleos_tra2_N 221..290 CDD:280026 25/68 (37%)
Gate 302..398 CDD:284976 51/95 (54%)
Nucleos_tra2_C 403..627 CDD:284970 95/223 (43%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167847398
Domainoid 1 1.000 190 1.000 Domainoid score I3256
eggNOG 1 0.900 - - E1_COG1972
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H32533
Inparanoid 1 1.050 376 1.000 Inparanoid score I2058
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG63093
OrthoDB 1 1.010 - - D251221at33208
OrthoFinder 1 1.000 - - FOG0001233
OrthoInspector 1 1.000 - - mtm8877
orthoMCL 1 0.900 - - OOG6_102197
Panther 1 1.100 - - LDO PTHR10590
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X691
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1514.770

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