DRSC/TRiP Functional Genomics Resources

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Protein Alignment CNT2 and slc28a3

DIOPT Version :9

Sequence 1:NP_610446.1 Gene:CNT2 / 35914 FlyBaseID:FBgn0025709 Length:603 Species:Drosophila melanogaster
Sequence 2:XP_002935023.2 Gene:slc28a3 / 100492606 XenbaseID:XB-GENE-986047 Length:683 Species:Xenopus tropicalis


Alignment Length:595 Identity:227/595 - (38%)
Similarity:337/595 - (56%) Gaps:84/595 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 HPLD----------DTSEVANKKGYFEKN--------PKVARLVRISIYVLLHLCVVGYFSYATY 78
            |.||          ...|...||.:.|:.        .|..||::..||.:|   :.|:.:... 
 Frog    49 HQLDIYENNLSKWSSDEENLEKKSWIERKYDNVCSFCQKHRRLIKHIIYGIL---LAGFLAMVI- 109

  Fly    79 HYHDITNYECYWKDNPLCGINFCTGYGMLLLLLGFIYLGLFYYY--------------VFKPMVG 129
                           ..|.:||.....:.:|.|    ||:|:.:              :|.|   
 Frog   110 ---------------AACVLNFRRALALFVLTL----LGIFFVFWDLFMDRYEGKIVKLFSP--- 152

  Fly   130 HSLHRNYIKPFSKKWHNFSRTRVVSLASIALLLALLAIFVYFECRDETQKLVSLVAPCFFILCGY 194
                   |..|:|| |.|....|:   .|:|:..::...::...:....:|:|......::|..:
 Frog   153 -------IGTFTKK-HWFWMKWVI---WISLVAGVICWLIFDTAKMGANQLISFGGLVMYVLLMF 206

  Fly   195 VFSTNRRAINWRIVITGITCQFLLGIFCIRWEVGRKIFECLGNKVATFLGYATDGAEFVFGDFLV 259
            :||.:...:.||.|..||..|||||:..:|.:.|...|:.||.:|.|||.|:..||.||||:..:
 Frog   207 IFSKHPTKVRWRQVFWGIGLQFLLGLLILRTKPGFDAFDWLGIQVQTFLEYSNTGAMFVFGEKYL 271

  Fly   260 NNNVFAFAILPVIFFFSFFISILYYMGTMQWVVIKLGWILQQILGTTVCESVTAAANIFLGMSES 324
             ::.|||.:||::.|||..:|:|||||.|||::.|:||.:|:.:||:..||:.||.|||:|.:||
 Frog   272 -DHFFAFKVLPIVIFFSTIMSMLYYMGFMQWLIKKVGWFMQKTMGTSPTESLVAAGNIFVGQTES 335

  Fly   325 PLLIRPYINKLTKSEIHSIMVSGFATVSGTVLAAYLSFGASAAHLITSSVMAAPATLAISKLYMP 389
            |||||||:..||:||||:||.:||||::|:||.||:|||.|::||:|:|||:|||.||:|||:.|
 Frog   336 PLLIRPYLELLTRSEIHAIMTAGFATIAGSVLGAYISFGVSSSHLLTASVMSAPAALAVSKLFWP 400

  Fly   390 ETEESQTS-SDSIELEKSQDSSLLDAASSGASNAVPIVLGIIANIVAFVAFIAFLNGLVSWFGYL 453
            |||..:.: ...::|||.:..::|:|||.|||.::|:|..|..|::||::.:||.|..:||.|.:
 Frog   401 ETEPIKVNMKHGMKLEKGEARNILEAASQGASASIPLVANIAVNLMAFLSLLAFFNAALSWLGNM 465

  Fly   454 VGLEQIDFEWIFSKLFIPLVWAMGVPKEDCDIIAKVVATKTIINEFVAYERLG-----------Q 507
            ....|:.||.|.|.:|:|..:.|||..||..|:.|::..||..|||||||.|.           .
 Frog   466 FDYPQLSFEVICSYVFMPFSFMMGVDWEDSFIVGKLIGYKTFFNEFVAYEYLAGLINKRKESGPM 530

  Fly   508 YIE--NNDITARSAGIATFAICGFANPSSLGILIGSLSAMAPHRRSTITAVAFRAFVVGSIVCFV 570
            |||  ...::.||..|||:|:|||||..||||.||.||:|||.|:..|.:.|.||.:.|::.||:
 Frog   531 YIEGIKQYMSIRSETIATYALCGFANFGSLGITIGGLSSMAPSRKGDIASGAIRAMIAGTVACFM 595

  Fly   571 SASFAGILIQ 580
            :|..||:|.|
 Frog   596 TACIAGLLTQ 605

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CNT2NP_610446.1 nupC 180..578 CDD:273278 192/411 (47%)
Nucleos_tra2_N 187..254 CDD:280026 26/66 (39%)
Gate 268..363 CDD:284976 55/94 (59%)
Nucleos_tra2_C 368..578 CDD:284970 100/223 (45%)
slc28a3XP_002935023.2 nupC 192..603 CDD:273278 192/411 (47%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 187 1.000 Domainoid score I3281
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H32533
Inparanoid 1 1.050 382 1.000 Inparanoid score I2007
OMA 1 1.010 - - QHG63093
OrthoDB 1 1.010 - - D251221at33208
OrthoFinder 1 1.000 - - FOG0001233
OrthoInspector 1 1.000 - - mtm9539
Panther 1 1.100 - - LDO PTHR10590
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X691
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1111.080

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