DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8197 and Nlrp2

DIOPT Version :10

Sequence 1:NP_610445.1 Gene:CG8197 / 35912 FlyBaseID:FBgn0033369 Length:387 Species:Drosophila melanogaster
Sequence 2:NP_001413839.1 Gene:Nlrp2 / 684545 RGDID:1589140 Length:1048 Species:Rattus norvegicus


Alignment Length:392 Identity:98/392 - (25%)
Similarity:156/392 - (39%) Gaps:87/392 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MCDVL--LPCEYN----PKECPSPAAEKSRLFTILLLYCWQREYDKRPYRQFQFKRLTFE-ERIG 58
            :|:.|  .||...    ....|..|.||     :.|::|   .|:       ....||.: .::.
  Rat   705 LCEKLSSAPCHLQKVVLKNISPDDAYEK-----LCLIFC---GYE-------TISHLTLQGGKLD 754

  Fly    59 RRYHCIRDLRIIVNYLLRRPQLSVQISSLVVSNWDAGLLKDFVRSLLPVWYIELRLMRFPREFFV 123
            ...|.:  .:::.|.......||:...|.....||     ||                ||     
  Rat   755 SMLHSL--CKVVKNPACNLKFLSLGSCSTTAQKWD-----DF----------------FP----- 791

  Fly   124 MLRLNAAKMNVSQLSLEGTP--LTDEDVRILREFLLVSK-TLRRLNVSSCSLTQFNFALIADGVY 185
                 |.|.|.|.:||:.|.  |.|:.||:|......|| .|:|:::.:|.||:.....::..:.
  Rat   792 -----ALKANQSLISLDLTDNNLLDKGVRLLCNTWKQSKCILQRVSLENCHLTEVCCKDLSSVLM 851

  Fly   186 KSPGVRRLS-ANRLLG--------MSLSLDTEKISSVLSSLLMQNTLWALSLEHCELTAQDMIPI 241
            .|..:..|| |...||        .|||....|:.:::        ||:     |.:|:.....:
  Rat   852 VSQTLTHLSLAKNELGDNGVKKLCESLSFPKCKLQTLV--------LWS-----CNITSNGCHYL 903

  Fly   242 AEHLARTNSKFRRLRIACNKIGPDGAFFLLRGM-SMGGNLELLDLSYCSIGTHGGEWVAKYLASC 305
            ::.|.:..| .:.|.:..|:||..||.||...: |...||:.|.|..|||.....:..::.|.|.
  Rat   904 SKMLGQAPS-LKHLDLGLNRIGTTGAKFLCEALKSPRSNLKSLWLCGCSIIPTNCKDFSEILRSN 967

  Fly   306 RRLQVLHLNYNDMGPTAVNLILLAMKKQ-CKLEKLTLYGNHFDSRTAMIVRRLLDAEVVLHSELD 369
            :.|..|.|:.|.||..||.:...::|.| |.|:.|.|   .||.....| ::|:......|.:|.
  Rat   968 KSLNTLDLSQNVMGTDAVKIFCESLKLQICPLQTLRL---KFDEANPSI-QKLIQEMKESHPQLS 1028

  Fly   370 IS 371
            |:
  Rat  1029 IT 1030

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8197NP_610445.1 RNA1 <133..345 CDD:444072 65/225 (29%)
leucine-rich repeat 202..220 CDD:275380 4/17 (24%)
leucine-rich repeat 223..251 CDD:275380 5/27 (19%)
leucine-rich repeat 252..279 CDD:275380 9/27 (33%)
leucine-rich repeat 280..307 CDD:275380 8/26 (31%)
leucine-rich repeat 308..335 CDD:275380 10/27 (37%)
leucine-rich repeat 336..357 CDD:275380 6/20 (30%)
Nlrp2NP_001413839.1 None

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