DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8197 and si:ch73-286h23.3

DIOPT Version :10

Sequence 1:NP_610445.1 Gene:CG8197 / 35912 FlyBaseID:FBgn0033369 Length:387 Species:Drosophila melanogaster
Sequence 2:NP_001427705.1 Gene:si:ch73-286h23.3 / 569265 ZFINID:ZDB-GENE-070705-236 Length:2579 Species:Danio rerio


Alignment Length:412 Identity:102/412 - (24%)
Similarity:165/412 - (40%) Gaps:76/412 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 VLLPCEYNPKEC----------PSPAAE----KSRLFTILLLYCWQREYDKRPYRQFQFKRLTFE 54
            :|..|.:..|:|          ||...|    |::|...::.:......|.|  .:.:..||...
Zfish  2117 ILCVCRFTEKQCKILTSALKSNPSHLRELDLSKNQLNNTVVNHLCDVLKDSR--CKLETLRLRSC 2179

  Fly    55 ERIGRRYHCI-----------RDLRIIVNYLLRRPQLSVQISSLVVSNWDAGLLKDFVRSLLPVW 108
            |.:...|..:           |:|.:..|.|   ...:|:..|.::.|....|.|          
Zfish  2180 EMMDESYSAVTSALKSNPSHLRELNLSENKL---GDSAVKNLSDLLMNQQCKLEK---------- 2231

  Fly   109 YIELRLMRFPREFFVMLRLNAAKMNVS---QLSLEGTPLTDEDVRILREFLLVSK-TLRRLNVSS 169
             :.|.:.||..|..|:| ::|.|.|.|   .|:|.|..:.:..|.:|.:.|..|: .|..|::..
Zfish  2232 -LNLCVCRFSEEQCVIL-ISALKSNPSHLRDLNLNGNQIKNTGVNLLCDVLKDSRCKLETLSLCG 2294

  Fly   170 CSLTQFNFALIADGVYKSPGVRR---LSANRLLGMSLSLDTEKISSVLSSLLM--QNTLWALSLE 229
            ||:.:....::...:..:|...|   ||.|.|        .:.....||.|||  |..|..|:|.
Zfish  2295 CSIPEEQCVILTSALKSNPSHLRELDLSGNNL--------GDSAVKNLSDLLMKPQFNLEKLNLW 2351

  Fly   230 HCELTAQDMIPIAEHLARTNSKFRRLRIACNKIGPDG----AFFLLRGMSMGGNLELLDLSYCSI 290
            :|.||.:..:.:...|....|..|.|.:..|.:|..|    :..|::...   .|:.|:|.:|||
Zfish  2352 YCRLTEEQCVILTSALKPNPSHLRELNLGGNNVGDSGVKNLSDLLIKPQF---KLKKLNLWFCSI 2413

  Fly   291 GTHGGEWVAKYLASCRR-----LQVLHLNYNDMGPTAV-NLILLAMKKQCKLEKLTLYGNHFDSR 349
                .|.....|.|..:     |:.|:|:.|::|.:.| ||..|.||.|.|||||.:........
Zfish  2414 ----TEEQCVILTSALKSNPSHLRDLNLSRNNLGDSGVKNLSELLMKPQFKLEKLNMCDCSITEE 2474

  Fly   350 TAMIVRRLLDAEVVLHSELDIS 371
            ...|:...|.:......||::|
Zfish  2475 QCKILTSALKSNPSHLRELNLS 2496

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8197NP_610445.1 RNA1 <133..345 CDD:444072 65/230 (28%)
leucine-rich repeat 202..220 CDD:275380 5/19 (26%)
leucine-rich repeat 223..251 CDD:275380 7/27 (26%)
leucine-rich repeat 252..279 CDD:275380 6/30 (20%)
leucine-rich repeat 280..307 CDD:275380 9/26 (35%)
leucine-rich repeat 308..335 CDD:275380 12/27 (44%)
leucine-rich repeat 336..357 CDD:275380 5/20 (25%)
si:ch73-286h23.3NP_001427705.1 None

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