DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8197 and cep78

DIOPT Version :9

Sequence 1:NP_001286225.1 Gene:CG8197 / 35912 FlyBaseID:FBgn0033369 Length:387 Species:Drosophila melanogaster
Sequence 2:XP_009302592.1 Gene:cep78 / 564741 ZFINID:ZDB-GENE-070905-1 Length:672 Species:Danio rerio


Alignment Length:320 Identity:72/320 - (22%)
Similarity:115/320 - (35%) Gaps:107/320 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   106 PVWYIELRLMRFPREFFVMLRLNAAKMNVSQLSL-EGTPLTDEDVRILREFLLVSKTLRRLNVSS 169
            ||..::..|.|...||           |..|||| :.||:...        |.::|.|.::::.|
Zfish    30 PVRAVKACLSRGVLEF-----------NPDQLSLADWTPVLSA--------LAINKHLHQVSIRS 75

  Fly   170 CSLTQFNFALIADGVY------KSPGVR-----------------RLSANRLLGM-SLSLDTEKI 210
            |.|....    |..||      |:|.:.                 ..|:.|.|.: :|.|....:
Zfish    76 CHLLSTG----AQNVYRPHNKKKTPAIHSKTVSLQLCKAVQKCLCESSSLRTLQLHALPLRERDL 136

  Fly   211 SSVLSSLLMQNTLWALSLEHCELTAQDMIPI------------------------AEHLA----- 246
            :::...|....:|..|||.||.:..|.:..|                        |||:|     
Zfish   137 TALTKGLAKSVSLEHLSLAHCPIGDQGLEVICQSVKYSSTIKGVDFTSCNITWQGAEHMANIIKH 201

  Fly   247 ---RTNS-------KFRRL---------RIACNK---IGPDGAFFLLRGMSMGGNLELLDLSYCS 289
               |.:|       ::||.         ||..|.   ||..|...|.|.::....::.:||..|.
Zfish   202 QAMRRHSTAWVETLRYRRAEFEAMNGLRRITLNDNILIGDRGVSALARELTEDLWVKAVDLQRCG 266

  Fly   290 IGTHGGEWVAKYLASCRRLQVLHLNYNDMGPTAVNLILLAMKKQCKLEKLTLYGNHFDSR 349
            |...|.:.:.:.|.|...|.||.:..|   |...|.::.|:     |:|:.:...:.||:
Zfish   267 ISNDGAQVLEQMLQSNSTLCVLDIRRN---PLIDNNVVKAV-----LKKVLMNTKNLDSQ 318

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8197NP_001286225.1 leucine-rich repeat 134..161 CDD:275381 7/27 (26%)
LRR_RI 137..374 CDD:238064 64/289 (22%)
leucine-rich repeat 162..189 CDD:275381 8/32 (25%)
leucine-rich repeat 202..220 CDD:275380 3/17 (18%)
leucine-rich repeat 223..251 CDD:275380 14/66 (21%)
leucine-rich repeat 252..279 CDD:275380 10/38 (26%)
leucine-rich repeat 280..307 CDD:275380 7/26 (27%)
leucine-rich repeat 308..335 CDD:275380 7/26 (27%)
leucine-rich repeat 336..357 CDD:275380 4/14 (29%)
cep78XP_009302592.1 LRR_RI 12..293 CDD:238064 64/285 (22%)
leucine-rich repeat 101..125 CDD:275381 2/23 (9%)
leucine-rich repeat 126..145 CDD:275381 3/18 (17%)
leucine-rich repeat 149..176 CDD:275381 8/26 (31%)
leucine-rich repeat 177..203 CDD:275381 4/25 (16%)
leucine-rich repeat 204..227 CDD:275381 4/22 (18%)
leucine-rich repeat 228..250 CDD:275381 7/21 (33%)
leucine-rich repeat 251..284 CDD:275381 7/32 (22%)
leucine-rich repeat 285..307 CDD:275381 8/29 (28%)
MreC <425..>542 CDD:302802
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4308
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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