DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8197 and Nlrc5

DIOPT Version :10

Sequence 1:NP_610445.1 Gene:CG8197 / 35912 FlyBaseID:FBgn0033369 Length:387 Species:Drosophila melanogaster
Sequence 2:NP_001028379.2 Gene:Nlrc5 / 434341 MGIID:3612191 Length:1915 Species:Mus musculus


Alignment Length:499 Identity:99/499 - (19%)
Similarity:157/499 - (31%) Gaps:184/499 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 LLPCEYNPKECPSPAAEKSRLFTILLLYCWQREYDKRPYR-QFQFKRLTFEERIGRRYHCIRDLR 68
            |..|:..|              |.|...|...|....|.. |...|.|:.:           .|:
Mouse  1113 LQECQLEP--------------TSLTFLCATLEKSPGPLEVQLSCKSLSDD-----------SLK 1152

  Fly    69 IIVNYLLRRPQLS-VQISSLVVSNWDAGLLKDFVRSLLPVWYIELRLM----------------- 115
            |::..|.:.|||| :|:...|:|:....||.|.......|..:.||.:                 
Mouse  1153 ILLQCLPQLPQLSLLQLRHTVLSSRSPFLLADIFNLCPRVRKVTLRSLCHAVLHFDSNEEQEGVC 1217

  Fly   116 -RFP-----REFFVMLRLNAAKMN-VSQLSLEGTPLTDEDVRILREFLLVSKTLRRLNVSSCSLT 173
             .||     :|....|....:|.| :|||.|....|.|..:|.|.|.|........|::|..:::
Mouse  1218 CGFPGCSLSQEHMETLCCALSKCNALSQLDLTDNLLGDIGLRCLLECLPQLPISGWLDLSHNNIS 1282

  Fly   174 QFNFALIADGVYKSPGVRRLSAN-------RL-------LGMSL-----SLDTEKISSVLSSL-- 217
            |.....:.:.:...|.::.:|.:       |:       .|.||     |...|::|.:.|||  
Mouse  1283 QEGILYLLETLPSYPNIQEVSVSLSSEQIFRMCFSKKEGAGTSLRLCECSFSPEQVSKLASSLSQ 1347

  Fly   218 -------------------------------------------------LM-------------- 219
                                                             ||              
Mouse  1348 AQQLTELWLTKCHLDLPQLTMLLNLVNRPTGLLGLRLEEPWVDSVSLPALMEVCAQASGCLTELS 1412

  Fly   220 ----QNTLW---------------ALSLEHCELTAQD---MIPIAEHLAR--------------- 247
                |..||               ||.|.||:|..:.   ||.:.|..||               
Mouse  1413 ISEIQRKLWLQLEFPHQEGNSDSMALRLAHCDLETEHSHLMIQLVETYARLQQLSLSQVSFNDND 1477

  Fly   248 -TNSK-----------FRRLRIACNKIGPDGAFFLLRGMSMGGNLELLDLSYCSIGTHGGEWVAK 300
             |:||           .:..|:..:::.......|..|:....:||.||.|..|:.....|.:..
Mouse  1478 GTSSKLLQNILLSSCELKSFRLTFSQVSTKSLTHLAFGLGHCHHLEELDFSNNSLREEDTELLMG 1542

  Fly   301 YLASCRRLQVLHLNYNDMGPTAVNLILLAMKKQCKLEKLTLYGN 344
            .|....||:.|||::..:|.:::.|::..:.:...|:.|.|..|
Mouse  1543 ALQGTCRLKKLHLSFLPLGASSLALLIQGLSRMTLLQDLCLSHN 1586

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8197NP_610445.1 RNA1 <133..345 CDD:444072 67/346 (19%)
leucine-rich repeat 202..220 CDD:275380 10/91 (11%)
leucine-rich repeat 223..251 CDD:275380 14/61 (23%)
leucine-rich repeat 252..279 CDD:275380 3/26 (12%)
leucine-rich repeat 280..307 CDD:275380 8/26 (31%)
leucine-rich repeat 308..335 CDD:275380 6/26 (23%)
leucine-rich repeat 336..357 CDD:275380 4/9 (44%)
Nlrc5NP_001028379.2 Atypical_Card 1..94 CDD:436519
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 103..137
NACHT 223..>673 CDD:444362
NACHT 223..385 CDD:428606
LRR 1 622..646
RNA1 <640..936 CDD:444072
LRR 2 716..740
leucine-rich repeat 719..746 CDD:275380
LRR 3 744..771
leucine-rich repeat 747..774 CDD:275380
LRR 4 772..796
leucine-rich repeat 775..807 CDD:275380
leucine-rich repeat 808..838 CDD:275380
leucine-rich repeat 848..873 CDD:275381
RNA1 <861..1059 CDD:444072
LRR 5 871..898
leucine-rich repeat 874..898 CDD:275381
leucine-rich repeat 899..929 CDD:275381
LRR 6 900..923
leucine-rich repeat 930..977 CDD:275381
LRR 7 930..953
leucine-rich repeat 978..1008 CDD:275381
LRR 8 1006..1033
PPP1R42 1007..1307 CDD:455733 48/218 (22%)
leucine-rich repeat 1009..1033 CDD:275381
LRR 9 1034..1055
leucine-rich repeat 1037..1061 CDD:275381
LRR 10 1138..1161 6/33 (18%)
LRR 11 1162..1184 9/21 (43%)
LRR 12 1240..1263 9/22 (41%)
LRR 13 1265..1292 4/26 (15%)
LRR 14 1348..1371 0/22 (0%)
RNA1 <1445..1716 CDD:444072 31/142 (22%)
leucine-rich repeat 1463..1483 CDD:275381 2/19 (11%)
LRR 15 1481..1504 3/22 (14%)
leucine-rich repeat 1484..1520 CDD:275381 3/35 (9%)
LRR 16 1519..1542 7/22 (32%)
leucine-rich repeat 1522..1549 CDD:275380 8/26 (31%)
leucine-rich repeat 1550..1574 CDD:275380 6/23 (26%)
LRR 17 1552..1575 5/22 (23%)
LRR 18 1576..1598 4/11 (36%)
leucine-rich repeat 1578..1605 CDD:275380 4/9 (44%)
RNA1 <1596..1905 CDD:444072
LRR 19 1603..1626
leucine-rich repeat 1606..1633 CDD:275380
LRR 20 1631..1654
leucine-rich repeat 1634..1661 CDD:275380
LRR 21 1659..1682
leucine-rich repeat 1662..1689 CDD:275380
LRR 22 1687..1711
leucine-rich repeat 1690..1717 CDD:275380
LRR 23 1715..1738
leucine-rich repeat 1718..1743 CDD:275380
LRR 24 1741..1768
leucine-rich repeat 1744..1771 CDD:275380
LRR 25 1769..1795
leucine-rich repeat 1772..1795 CDD:275380
leucine-rich repeat 1796..1823 CDD:275380
LRR 26 1821..1845
leucine-rich repeat 1824..1843 CDD:275380
LRR 27 1849..1872
Blue background indicates that the domain is not in the aligned region.

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