DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8197 and CIITA

DIOPT Version :10

Sequence 1:NP_610445.1 Gene:CG8197 / 35912 FlyBaseID:FBgn0033369 Length:387 Species:Drosophila melanogaster
Sequence 2:XP_006720943.2 Gene:CIITA / 4261 HGNCID:7067 Length:1229 Species:Homo sapiens


Alignment Length:445 Identity:91/445 - (20%)
Similarity:142/445 - (31%) Gaps:149/445 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 PSPAAEKSRLFTILLLYC-----WQR-----------EY------DKRPYRQFQ------FKRLT 52
            |..|||....|...||.|     |..           :|      .||||..:.      ...|.
Human   797 PPRAAESELAFPSFLLQCFLGALWLALSGEIKDKELPQYLALTPRKKRPYDNWLEGVPRFLAGLI 861

  Fly    53 FEERIGRRYHCI-------------RDLRIIVNYL-------LRRPQLSVQISSLVVSNWDAGLL 97
            |:...    .|:             |..:::..||       ||..|| :::........:||:.
Human   862 FQPPA----RCLGALLGPSAAASVDRKQKVLARYLKRLQPGTLRARQL-LELLHCAHEAEEAGIW 921

  Fly    98 KDFVRSLLPVWYIELRLMRFPREFFVMLRLNAAKMNVSQLSLEGTPLTDEDVRILREFLLVSKTL 162
            :..|:.|                             ..:||..||.||..|..:|.:.|      
Human   922 QHVVQEL-----------------------------PGRLSFLGTRLTPPDAHVLGKAL------ 951

  Fly   163 RRLNVSSCSLTQFNFALIADGVYKSPGVRRLSANRLLGMSLSLDTEKISSVLSSLLMQNTLWALS 227
                  ..:...|:..|      :|.|:.......|:|:|.   ..:..:.||..:   .||...
Human   952 ------EAAGQDFSLDL------RSTGICPSGLGSLVGLSC---VTRFRAALSDTV---ALWESL 998

  Fly   228 LEHCEL----TAQDMIPIAEHLA----------------RTNSK-------------FRRLRIAC 259
            .:|.|.    .|::...|....|                ||.|.             .::|..|.
Human   999 QQHGETKLLQAAEEKFTIEPFKAKSLKDVEDLGKLVQTQRTRSSSEDTAGELPAVRDLKKLEFAL 1063

  Fly   260 NKI-GPDGAFFLLRGMSMGGNLELLDLSYCSIGTHGGEWVAKYLAS---CRRLQVLHLNYN---D 317
            ..: ||.....|:|.::...:|:.|||...|....|.|.|::..|:   .:.|:.|:|:.|   |
Human  1064 GPVSGPQAFPKLVRILTAFSSLQHLDLDALSENKIGDEGVSQLSATFPQLKSLETLNLSQNNITD 1128

  Fly   318 MGPTAVNLILLAMKKQCKLEKLTLYGNHFDSRTAMIVRRLLDAEVVLHSELDISY 372
            :|  |..|..........|.:|:||.|......|..:.|:|...|.|. .:|:.|
Human  1129 LG--AYKLAEALPSLAASLLRLSLYNNCICDVGAESLARVLPDMVSLR-VMDVQY 1180

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8197NP_610445.1 RNA1 <133..345 CDD:444072 55/251 (22%)
leucine-rich repeat 202..220 CDD:275380 3/17 (18%)
leucine-rich repeat 223..251 CDD:275380 9/47 (19%)
leucine-rich repeat 252..279 CDD:275380 6/27 (22%)
leucine-rich repeat 280..307 CDD:275380 9/29 (31%)
leucine-rich repeat 308..335 CDD:275380 8/29 (28%)
leucine-rich repeat 336..357 CDD:275380 6/20 (30%)
CIITAXP_006720943.2 NACHT 513..682 CDD:428606
NLRC4_HD2 812..917 CDD:465499 18/109 (17%)
LRR_RI 888..1213 CDD:238064 73/350 (21%)
leucine-rich repeat 1085..1112 CDD:275381 9/26 (35%)
leucine-rich repeat 1116..1154 CDD:275381 12/39 (31%)
leucine-rich repeat 1170..1200 CDD:275381 4/12 (33%)
Blue background indicates that the domain is not in the aligned region.

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