DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8197 and Nlrp12

DIOPT Version :10

Sequence 1:NP_610445.1 Gene:CG8197 / 35912 FlyBaseID:FBgn0033369 Length:387 Species:Drosophila melanogaster
Sequence 2:NP_001028603.1 Gene:Nlrp12 / 378425 MGIID:2676630 Length:1054 Species:Mus musculus


Alignment Length:285 Identity:70/285 - (24%)
Similarity:114/285 - (40%) Gaps:40/285 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   127 LNAAKMNVSQLSLEGTPLTDEDVRILREFLLVSKTLRRLNVSSCSLTQFNFALIADGVYKSPGVR 191
            |..|...:..|.|:...::....:.|...::.::.|.||::|..|:......|:.:|: :.|..|
Mouse   730 LRHASCKLQNLRLKRCQISGSACQDLAAAVIANRNLIRLDLSDNSIGVPGLELLCEGL-QHPRCR 793

  Fly   192 -----------RLSANRLLGMSLSLDTEKISSVLS---------SLLMQ---------NTLWALS 227
                       ..:|.|.|...||.::..:...|:         .||.|         .|||   
Mouse   794 LQMIQLRKCLLEAAAGRSLASVLSNNSYLVELDLTGNPLEDSGLKLLCQGLRHPVCRLRTLW--- 855

  Fly   228 LEHCELTAQDMIPIAEHLARTNSKFRRLRIACNKIGPDGAFFLLRGMSMGG-NLELLDLSYCSIG 291
            |:.|.|.......:|..| :.|.....|.:..|.:|..|...|..|:|... .|:.|.|..|.:|
Mouse   856 LKICHLGQASCEDLASTL-KMNQSLLELDLGLNDLGDSGVLLLCEGLSHPDCKLQTLRLGICRLG 919

  Fly   292 THGGEWVAKYLASCRRLQVLHLNYNDMGPTAVNLILLAMKKQ-CKLEKLTLYGNHFDSRTAMIVR 355
            :.....:|..|.....||.|.|::||:|...:.|:...::.| |:|:||.|......|:....:.
Mouse   920 SVACVGIASVLQVNTCLQELDLSFNDLGDRGLQLLGEGLRHQTCRLQKLWLDNCGLTSKACEDLS 984

  Fly   356 RLLDAEVVLHSELDISYTYDEALQD 380
            .:|.....|| ||   |..:.||.|
Mouse   985 SILGISQTLH-EL---YLTNNALGD 1005

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8197NP_610445.1 RNA1 <133..345 CDD:444072 58/242 (24%)
leucine-rich repeat 202..220 CDD:275380 5/26 (19%)
leucine-rich repeat 223..251 CDD:275380 8/27 (30%)
leucine-rich repeat 252..279 CDD:275380 7/27 (26%)
leucine-rich repeat 280..307 CDD:275380 7/26 (27%)
leucine-rich repeat 308..335 CDD:275380 9/27 (33%)
leucine-rich repeat 336..357 CDD:275380 5/20 (25%)
Nlrp12NP_001028603.1 PYRIN 12..87 CDD:460678
FISNA 129..200 CDD:464185
NACHT 211..380 CDD:428606
NOD2_WH 459..512 CDD:465501
NLRC4_HD2 514..621 CDD:465499
leucine-rich repeat 708..736 CDD:275380 2/5 (40%)
LRR_RI 737..1028 CDD:238064 68/278 (24%)
leucine-rich repeat 737..764 CDD:275380 3/26 (12%)
leucine-rich repeat 765..793 CDD:275380 8/28 (29%)
leucine-rich repeat 794..821 CDD:275380 5/26 (19%)
LRR 1 821..841 2/19 (11%)
leucine-rich repeat 822..850 CDD:275380 4/27 (15%)
LRR 2 850..871 6/23 (26%)
leucine-rich repeat 851..878 CDD:275380 9/30 (30%)
LRR 3 878..899 5/20 (25%)
leucine-rich repeat 879..907 CDD:275380 7/27 (26%)
LRR 4 907..928 5/20 (25%)
leucine-rich repeat 908..935 CDD:275380 7/26 (27%)
LRR 5 935..955 8/19 (42%)
LRR 6 964..985 5/20 (25%)
leucine-rich repeat 965..985 CDD:275380 5/19 (26%)
LRR 7 992..1013 8/18 (44%)
LRR 8 1021..1042
Blue background indicates that the domain is not in the aligned region.

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