DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8197 and Nod2

DIOPT Version :10

Sequence 1:NP_610445.1 Gene:CG8197 / 35912 FlyBaseID:FBgn0033369 Length:387 Species:Drosophila melanogaster
Sequence 2:XP_008770595.3 Gene:Nod2 / 291912 RGDID:1306368 Length:1013 Species:Rattus norvegicus


Alignment Length:335 Identity:73/335 - (21%)
Similarity:122/335 - (36%) Gaps:66/335 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    72 NYLLRR--PQLSVQISSL-----------------VVSNWDAGLLKDFVRSLLPVWYIELR---- 113
            |.||.|  |.|.:|.|.:                 :.:.:.||||....|.||....:..|    
  Rat   610 NSLLLRLLPNLCIQGSRVKGGQAALLQKAEPHNLQITAAFLAGLLSQQHRDLLAACQVPERVLLQ 674

  Fly   114 --------LMRFPREFFVMLRLNAAKMNVSQLSLEGTPLTDEDVRILREFLLVSKTLRRLNVSSC 170
                    |....||.|..:.........|..::.|.......:..::|..|..:.:|||::...
  Rat   675 RQARARSCLAHSLREHFHSIPPAVPGETKSMHAMPGFIWLIRSLYEMQEVQLAREAVRRLDIGHL 739

  Fly   171 SLTQFNFALIADGVYKSPGVRRLSANRLLGMSLSLDTEKISSV------------LSSLLMQNTL 223
            .||   |..:  |..:...:..:..:....::|.||...:..|            .:..|..|.:
  Rat   740 KLT---FCRV--GPAECAALAFVLQHLQRPVALQLDHNSVGDVGVEQLLPCLGVCTALYLRDNNI 799

  Fly   224 ---WALSLEHCELTAQDMIPIAE---------------HLARTNSKFRRLRIACNKIGPDGAFFL 270
               .|.:|..|.|..:.:..:|.               .|......|..||:..|.|...||..|
  Rat   800 SDRGARTLVECALRCEQLQKLASLFNNKLTDGCASSVAKLLAHKQNFLSLRVGNNHITAAGAEVL 864

  Fly   271 LRGMSMGGNLELLDLSYCSIGTHGGEWVAKYLASCRRLQVLHLNYNDMGPTAVNLILLAMKKQCK 335
            .:|:....:|:.|.....|:|..|.:.:|:.:|..:||:.|.|..|::|....:.:.|.::|...
  Rat   865 AQGLKSNTSLQFLGFWGNSVGDKGSQALAEVVADHQRLKWLSLVGNNIGSVGAHALALMLEKNKS 929

  Fly   336 LEKLTLYGNH 345
            ||:|.|..||
  Rat   930 LEELCLEENH 939

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8197NP_610445.1 RNA1 <133..345 CDD:444072 51/241 (21%)
leucine-rich repeat 202..220 CDD:275380 5/29 (17%)
leucine-rich repeat 223..251 CDD:275380 6/45 (13%)
leucine-rich repeat 252..279 CDD:275380 9/26 (35%)
leucine-rich repeat 280..307 CDD:275380 7/26 (27%)
leucine-rich repeat 308..335 CDD:275380 7/26 (27%)
leucine-rich repeat 336..357 CDD:275380 6/10 (60%)
Nod2XP_008770595.3 None

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