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Protein Alignment CG8197 and Nlrc3

DIOPT Version :9

Sequence 1:	NP_001286225.1	Gene:	CG8197 / 35912	FlyBaseID:	FBgn0033369	Length:	387	Species:	Drosophila melanogaster
Sequence 2:	XP_011244204.1	Gene:	Nlrc3 / 268857	MGIID:	2444070	Length:	1109	Species:	Mus musculus

Alignment Length:	248	Identity:	62/248 - (25%)
Similarity:	104/248 - (41%)	Gaps:	34/248 - (13%)

- Green bases have known domain annotations that are detailed below.

  Fly   123 VMLRLNAAKMNVSQLSLEGTPLTDEDVRILREFLLVSKTLRRLNVSSCSLTQFNFALIADGVYKS 187
            |::|...:...:|.|:|....::.|..:.|.:.|..:.||:.|::::..|.......||..|.::
Mouse   862 VLMRALCSNQTLSSLNLRENSISPEGAQALTQALCRNNTLKHLDLTANLLHDRGAQAIAVAVGEN 926

  Fly   188 PGVRRL---------SANRLLGMSLSLD--------------TEKISSVLSSLLMQNTLWALSLE 229
            ..:..|         .|.|.||.:|.|:              .|..|||..:|.:..||.||.|:
Mouse   927 HSLTHLHLQWNFIQAGAARALGQALQLNRTLTTLDLQENAIGDEGASSVAGALKVNTTLIALYLQ 991

  Fly   230 HCELTAQDMIPIAEHLARTNSKFRRLR-IAC------NKIGPDGAFFLLRGMSMGGNLELLDLSY 287
            ...:.:|....:.|.|. .|.....|. :.|      |.:|..||..|...:.:..:|..|:|..
Mouse   992 VASIGSQGAQALGEALT-VNRTLEILELLTCPDSLRGNDVGAAGAKALANALKLNSSLRRLNLQE 1055

  Fly   288 CSIGTHGGEWVAKYLASCRRLQVLHLNYNDMGPTAVNLILLAMKKQ---CKLE 337
            .|:|..|..:||..|:....|..::|..|.:|.:|..:|..|:|..   |.:|
Mouse  1056 NSLGMDGAIFVASALSENHGLHHINLQGNPIGESAARMISEAIKTNAPTCTVE 1108

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.