DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8197 and Nod2

DIOPT Version :10

Sequence 1:NP_610445.1 Gene:CG8197 / 35912 FlyBaseID:FBgn0033369 Length:387 Species:Drosophila melanogaster
Sequence 2:XP_006531091.1 Gene:Nod2 / 257632 MGIID:2429397 Length:1014 Species:Mus musculus


Alignment Length:310 Identity:72/310 - (23%)
Similarity:118/310 - (38%) Gaps:57/310 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    81 SVQISSLVVSNWDAGLLKDFVRSLLPVWYIELR------------LMRFPREFFVMLRLNAAKMN 133
            ::||::..:    ||||....|.||....:..|            |....||.|..:........
Mouse   643 NLQITAAFL----AGLLSQQHRDLLAACQVSERVLLQRQARARSCLAHSLREHFHSIPPAVPGET 703

  Fly   134 VSQLSLEGTPLTDEDVRILREFLLVSKTLRRLNVSSCSLT------------------------- 173
            .|..::.|.......:..::|..|..:.:|||::....||                         
Mouse   704 KSMHAMPGFIWLIRSLYEMQEEQLAQEAVRRLDIGHLKLTFCRVGPAECAALAFVLQHLQRPVAL 768

  Fly   174 QFNFALIADGVYKSPGVRRLSANRLLGM--SLSLDTEKISS------VLSSLLMQNTLWALSLEH 230
            |.::..:.|     .||.:|  ...||:  :|.|....||.      |..:|..:......||.:
Mouse   769 QLDYNSVGD-----VGVEQL--RPCLGVCTALYLRDNNISDRGARTLVECALRCEQLQKLASLFN 826

  Fly   231 CELTAQDMIPIAEHLARTNSKFRRLRIACNKIGPDGAFFLLRGMSMGGNLELLDLSYCSIGTHGG 295
            .:||......:|:.||. ...|..||:..|.|...||..|.:|:....:|:.|.....|:|..|.
Mouse   827 NKLTDACACSMAKLLAH-KQNFLSLRVGNNHITAAGAEVLAQGLKSNTSLKFLGFWGNSVGDKGT 890

  Fly   296 EWVAKYLASCRRLQVLHLNYNDMGPTAVNLILLAMKKQCKLEKLTLYGNH 345
            :.:|:.:|..:.|:.|.|..|::|......:.|.::|...||:|.|..||
Mouse   891 QALAEVVADHQNLKWLSLVGNNIGSMGAEALALMLEKNKSLEELCLEENH 940

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8197NP_610445.1 RNA1 <133..345 CDD:444072 56/244 (23%)
leucine-rich repeat 202..220 CDD:275380 6/23 (26%)
leucine-rich repeat 223..251 CDD:275380 7/27 (26%)
leucine-rich repeat 252..279 CDD:275380 9/26 (35%)
leucine-rich repeat 280..307 CDD:275380 7/26 (27%)
leucine-rich repeat 308..335 CDD:275380 7/26 (27%)
leucine-rich repeat 336..357 CDD:275380 6/10 (60%)
Nod2XP_006531091.1 DD 7..87 CDD:472698
NACHT 85..>599 CDD:444362
DD 107..186 CDD:472698
NACHT 266..436 CDD:428606
NLRC4_HD2 576..730 CDD:465499 18/90 (20%)
RNA1 <738..1005 CDD:444072 51/211 (24%)
leucine-rich repeat 768..789 CDD:275380 6/27 (22%)
leucine-rich repeat 790..817 CDD:275380 6/26 (23%)
leucine-rich repeat 818..847 CDD:275380 7/29 (24%)
leucine-rich repeat 848..874 CDD:275380 8/25 (32%)
leucine-rich repeat 875..902 CDD:275380 7/26 (27%)
leucine-rich repeat 903..930 CDD:275380 7/26 (27%)
leucine-rich repeat 931..958 CDD:275380 6/10 (60%)
leucine-rich repeat 959..980 CDD:275380
Blue background indicates that the domain is not in the aligned region.

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