DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8197 and Nlrp2

DIOPT Version :10

Sequence 1:NP_610445.1 Gene:CG8197 / 35912 FlyBaseID:FBgn0033369 Length:387 Species:Drosophila melanogaster
Sequence 2:NP_808358.2 Gene:Nlrp2 / 232827 MGIID:3041206 Length:1046 Species:Mus musculus


Alignment Length:299 Identity:77/299 - (25%)
Similarity:119/299 - (39%) Gaps:64/299 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    78 PQLSVQISSLVVSNWDAGLLKDFVRSLLPVWYIELRLMRFPREFFVMLRLNAAKMNVSQLSLEGT 142
            |.|.|..|.:.:...|..||....:.|..:|                   ...|..:.::|||..
Mouse   791 PVLKVNQSLIFLDLTDNSLLDKSAKLLCNIW-------------------KEPKCILQRVSLENC 836

  Fly   143 PLTDEDVRILREFLLVSKTLRRLNVSSCSLTQFNFALIADGVYKSPGVRRLSANRLLGMSLSLDT 207
            .||:...:.|...|:||:||..|::::..|        .|.     ||:.|             .
Mouse   837 QLTEACCKDLSSVLMVSRTLTHLSLANNKL--------GDN-----GVKNL-------------C 875

  Fly   208 EKISSV---LSSLLMQNTLWALSLEHCELTAQDMIPIAEHLARTNSKFRRLRIACNKIGPDGAFF 269
            |.||..   |.:|:    ||:     |.:|......:::.|.:|.| .:.|.:..|:||..||.|
Mouse   876 ESISCTECNLQTLV----LWS-----CNITNAGCHYLSKMLKQTLS-LKHLDLGLNRIGTKGAKF 930

  Fly   270 LLRGM-SMGGNLELLDLSYCSIGTHGGEWVAKYLASCRRLQVLHLNYNDMGPTAVNLILLAMKKQ 333
            |...: :....|:.|.|..|||.....:..::.|.|.:.|..|.|:.|.:|..|:.....|:|.|
Mouse   931 LCEALKNPKSKLKSLWLCGCSITPLNCQDFSETLRSNKSLNTLDLSQNVLGTDAIKTFCEALKLQ 995

  Fly   334 -CKLEKLTLYGNHFDSRTAMIVRRLLDAEVVLHSELDIS 371
             |.|:.|.|   .||.....| :.|:....|.|.:|.||
Mouse   996 ICPLQMLRL---KFDEAKPSI-QNLIQEMKVSHPQLRIS 1030

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8197NP_610445.1 RNA1 <133..345 CDD:444072 58/216 (27%)
leucine-rich repeat 202..220 CDD:275380 5/20 (25%)
leucine-rich repeat 223..251 CDD:275380 6/27 (22%)
leucine-rich repeat 252..279 CDD:275380 8/27 (30%)
leucine-rich repeat 280..307 CDD:275380 8/26 (31%)
leucine-rich repeat 308..335 CDD:275380 9/27 (33%)
leucine-rich repeat 336..357 CDD:275380 6/20 (30%)
Nlrp2NP_808358.2 Pyrin_NALPs 11..94 CDD:260032
P-loop containing Nucleoside Triphosphate Hydrolases 182..345 CDD:476819
NLRC4_HD2 493..605 CDD:465499
leucine-rich repeat 743..766 CDD:275380
PPP1R42 <769..1008 CDD:455733 69/274 (25%)
leucine-rich repeat 771..798 CDD:275380 3/6 (50%)
leucine-rich repeat 799..827 CDD:275380 6/46 (13%)
leucine-rich repeat 828..855 CDD:275380 9/26 (35%)
leucine-rich repeat 856..884 CDD:275380 10/53 (19%)
leucine-rich repeat 885..912 CDD:275380 8/35 (23%)
leucine-rich repeat 913..941 CDD:275380 8/27 (30%)
leucine-rich repeat 942..969 CDD:275380 8/26 (31%)
leucine-rich repeat 970..989 CDD:275380 6/18 (33%)
Blue background indicates that the domain is not in the aligned region.

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