DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8197 and LRRC34

DIOPT Version :10

Sequence 1:NP_610445.1 Gene:CG8197 / 35912 FlyBaseID:FBgn0033369 Length:387 Species:Drosophila melanogaster
Sequence 2:NP_001166250.1 Gene:LRRC34 / 151827 HGNCID:28408 Length:464 Species:Homo sapiens


Alignment Length:251 Identity:51/251 - (20%)
Similarity:104/251 - (41%) Gaps:36/251 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   137 LSLEGTPLTDEDVRILREFLLVSKTLRRLNVSSCSLTQFNFALIADGVYKSPGVRRLSANRLLGM 201
            |.:.|..:.::........|.::.:|.:|::..|.|...:....|..:.::..::.::.||.:  
Human   184 LRMTGNKIENKGGMFFAAMLQINSSLEKLDLGDCDLGMQSVIAFATVLTQNQAIKAINLNRPI-- 246

  Fly   202 SLSLDTEKISSVLSSLLMQNTLWALSLEHCELTAQDMIPIAEHLAR----------------TNS 250
             |..:.|:.:..:..:|.:|        ||        .:|.|:.:                .||
Human   247 -LYSEQEESTVHVGRMLKEN--------HC--------LVALHMCKHDIKNSGIQQLCDALYLNS 294

  Fly   251 KFRRLRIACNKIGPDGAFFLLRGMSMGGNLELLDLSYCSIGTHGGEWVAKYLASCRR-LQVLHLN 314
            ..|.|.::||||..||..:|...:.....||::|||:..|...|..::::.|.|..| |:.|.:.
Human   295 SLRYLDVSCNKITHDGMVYLADVLKSNTTLEVIDLSFNRIENAGANYLSETLTSHNRSLKALSVV 359

  Fly   315 YNDMGPTAVNLILLAMKKQCKLEKLTLYGNHFDSRTAMIVRRLLDAEVVLHSELDI 370
            .|::....:..:..:||.......:.::||.||..|.:....|:....:.....|:
Human   360 SNNIEGEGLVALSQSMKTNLTFSHIYIWGNKFDEATCIAYSDLIQMGCLKPDNTDV 415

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8197NP_610445.1 RNA1 <133..345 CDD:444072 45/224 (20%)
leucine-rich repeat 202..220 CDD:275380 3/17 (18%)
leucine-rich repeat 223..251 CDD:275380 5/43 (12%)
leucine-rich repeat 252..279 CDD:275380 9/26 (35%)
leucine-rich repeat 280..307 CDD:275380 9/26 (35%)
leucine-rich repeat 308..335 CDD:275380 5/26 (19%)
leucine-rich repeat 336..357 CDD:275380 5/20 (25%)
LRRC34NP_001166250.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..48
RNA1 <133..378 CDD:444072 44/212 (21%)
leucine-rich repeat 153..180 CDD:275380
leucine-rich repeat 181..208 CDD:275380 3/23 (13%)
leucine-rich repeat 209..244 CDD:275380 5/34 (15%)
leucine-rich repeat 268..295 CDD:275380 3/26 (12%)
LRR 1 295..315 8/19 (42%)
leucine-rich repeat 296..323 CDD:275380 9/26 (35%)
LRR 2 323..345 7/21 (33%)
leucine-rich repeat 324..352 CDD:275380 9/27 (33%)
leucine-rich repeat 353..374 CDD:275380 3/20 (15%)
leucine-rich repeat 375..402 CDD:275380 7/26 (27%)
Blue background indicates that the domain is not in the aligned region.

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