DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8197 and nlrx1

DIOPT Version :10

Sequence 1:NP_610445.1 Gene:CG8197 / 35912 FlyBaseID:FBgn0033369 Length:387 Species:Drosophila melanogaster
Sequence 2:XP_004916107.1 Gene:nlrx1 / 100489572 XenbaseID:XB-GENE-6039800 Length:953 Species:Xenopus tropicalis


Alignment Length:430 Identity:98/430 - (22%)
Similarity:163/430 - (37%) Gaps:96/430 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 CPSPAAEKSRLFTILLLYCWQREYDKRPYRQFQFKRLTFEERIGRRYHCI-----RDLRIIVNYL 74
            |..|..|.:.:|||..:    :||....|......:.|. :|:||....|     .|:..:||.|
 Frog   463 CIKPGHETTFVFTIPAM----QEYLAALYVVLGENKTTL-QRVGREVSDIINKAGEDVVAVVNVL 522

  Fly    75 LRRPQLSVQISSLVVSNWDAGLLKDFVRSLLPVWYIELRLMRFPREFFV------MLRLNAA--- 130
            .:  .|.::|.:|.      .||:     ::|..|  .::....||...      |.|...|   
 Frog   523 SK--FLPLRIFALF------NLLR-----VVPKLY--GKVSGQSRENIAQTMTSEMFREEDAFND 572

  Fly   131 ----KMNVSQLSLEG-TPLTDEDV----------RILREFLLVSKTLRRLNVSSCSLTQFNFALI 180
                ::|.|.|.:|| :..|||||          .|....||..:....|:...||:...:...|
 Frog   573 DVLDQINSSILGVEGPSQNTDEDVFGKQEAFELFPIFMAGLLSRQNRAMLDQLGCSIMNTSALEI 637

  Fly   181 ADGVYK---SPGVRRLSANRLL----------------GMSLSLDTEKIS---------SVLSSL 217
            ..|:.|   ...:|||....|:                |:..||....:|         :|:||:
 Frog   638 TRGLKKHLLRCSLRRLPPTELMDFLFFLYEFQNEAFTAGLVSSLQDLDLSAVRMTPLKCTVVSSV 702

  Fly   218 L--MQNTLWALSLEHCELTAQDMIPIAEHLARTNSKFRRLRIACNKIGPDGAFFLLRGMSMGGNL 280
            :  ....:...:.:.|:|....:..::..|.|..|    |.:..|.:|||.. ..::.:.:..:.
 Frog   703 MGGSGKPMTEANFKSCDLDPDAIRALSPVLRRCQS----LNLQMNSLGPDSC-KEIKDVLLHPDC 762

  Fly   281 ELLDLSYCS--IGTHGGEWVAKYLA---SCRRLQVLHLNYNDMGPTAVNLILLAMKKQCKLEKLT 340
            .:..|..|:  :.:.||..:|:.||   |.|.|.:||.|..|.|   ..::...:.|...|::|.
 Frog   763 AVTSLRLCNNPLTSEGGRLIAEALAGNNSLRHLSLLHTNLGDEG---AEILASQLGKNTHLQELN 824

  Fly   341 LYGNHFDSRTAMIVRRLLDAEVVLHSELDISYTYDEALQD 380
            |..|....:.|:    .|..|...:..||..:.|...|.|
 Frog   825 LAYNGIHDQAAL----RLGEEAARNPTLDRVHLYFNELSD 860

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8197NP_610445.1 RNA1 <133..345 CDD:444072 59/257 (23%)
leucine-rich repeat 202..220 CDD:275380 6/28 (21%)
leucine-rich repeat 223..251 CDD:275380 4/27 (15%)
leucine-rich repeat 252..279 CDD:275380 5/26 (19%)
leucine-rich repeat 280..307 CDD:275380 8/31 (26%)
leucine-rich repeat 308..335 CDD:275380 7/26 (27%)
leucine-rich repeat 336..357 CDD:275380 5/20 (25%)
nlrx1XP_004916107.1 NACHT 153..>506 CDD:444362 13/47 (28%)
P-loop containing Nucleoside Triphosphate Hydrolases 153..304 CDD:476819
leucine-rich repeat 681..714 CDD:275380 5/32 (16%)
leucine-rich repeat 715..734 CDD:275380 3/18 (17%)
leucine-rich repeat 735..763 CDD:275380 6/32 (19%)
RNA1 <737..906 CDD:444072 34/136 (25%)
leucine-rich repeat 764..791 CDD:275380 7/26 (27%)
leucine-rich repeat 792..819 CDD:275380 8/29 (28%)
leucine-rich repeat 820..846 CDD:275380 7/29 (24%)
Blue background indicates that the domain is not in the aligned region.

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