DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8197 and si:dkey-23k10.3

DIOPT Version :10

Sequence 1:NP_610445.1 Gene:CG8197 / 35912 FlyBaseID:FBgn0033369 Length:387 Species:Drosophila melanogaster
Sequence 2:XP_009290117.1 Gene:si:dkey-23k10.3 / 100150225 ZFINID:ZDB-GENE-131126-11 Length:692 Species:Danio rerio


Alignment Length:445 Identity:98/445 - (22%)
Similarity:154/445 - (34%) Gaps:140/445 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    69 IIVNYLLRR-----PQLSVQISSLVVSNWDAGLLKDFVRSLLPVWYIE-LRLMR--FPREFFVML 125
            :::|..||.     .:|.:..:||...:  ..||...:.|  |.|.:: |:|:.  |..|....|
Zfish   192 VVLNKALRSNPSHLKELDLSENSLCYLH--TMLLSSVLES--PYWELKTLKLVNCSFTEEGGAAL 252

  Fly   126 RLNAAKMNVSQLSLEGTPLTDEDVRILREFLLVSK------TLRRLNVSSCSLTQFNFALIADGV 184
             ::|.:.|.|.  |....|:..::..|...:|.|.      .|..|.::.|.:|...||.:..|:
Zfish   253 -MSALRSNPSH--LRELDLSKNNIGYLTMMVLSSAMEIPYWELEILRLNDCGITDDGFAALGAGL 314

  Fly   185 YKSPGVRR---LSANRL-------LGMSL-----SLDTEKISS---------VLSSLLMQN---- 221
            ..:|...|   ||.|:|       |.::|     .|:|.::.|         ||.|.|..|    
Zfish   315 RSNPSYLRELDLSKNKLGEFGVHMLSIALEMPYCQLETLRLVSCDITGNGWIVLVSALRSNPSHL 379

  Fly   222 ---------------------------TLWALSLEHCELTAQDMIPIAEHLARTNSKFRRLRIAC 259
                                       .|..|.|.:|.|..::.:.:|..|....||.|.|.::.
Zfish   380 RNLDLSGNNLECFEIKLLSEVLESPYCKLETLKLRNCNLKDEECVSLASALRLKISKLRELDLSE 444

  Fly   260 NKIGPDG--AFFL-------------------------------------LRGMSMGGN------ 279
            ||:|..|  |||.                                     |:.:.:.||      
Zfish   445 NKLGDSGVKAFFAELEGHLSKFDALRFVNCGLTDEGCGVLASVLSSNPSHLKELDLSGNKVEDSG 509

  Fly   280 --------------LELLDLSYCSIGTHGGEWVAKYLAS-CRRLQVLHLNYNDMGPTAVNLILLA 329
                          ||.|.|..|.:...|...:|..|.| ...|:||.|:.|.:..:.|.||...
Zfish   510 VKMLSDGLEDYCCRLETLKLVGCGLTDEGCASLASALTSNSSHLRVLDLSKNKLSDSGVRLISTG 574

  Fly   330 MKK-QCKLEKLTLYGNHFDSRTAMIVRRLLDAEVVLHSELDISYTYDEALQDYRV 383
            ::. .||:|.|.|.....:......:...|........|||:|   :..|.|:.|
Zfish   575 LENPHCKVEILWLVDCDVNDEGCAALASALTFNFSNLRELDLS---ENNLGDFGV 626

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8197NP_610445.1 RNA1 <133..345 CDD:444072 73/333 (22%)
leucine-rich repeat 202..220 CDD:275380 8/31 (26%)
leucine-rich repeat 223..251 CDD:275380 7/27 (26%)
leucine-rich repeat 252..279 CDD:275380 10/65 (15%)
leucine-rich repeat 280..307 CDD:275380 9/27 (33%)
leucine-rich repeat 308..335 CDD:275380 8/27 (30%)
leucine-rich repeat 336..357 CDD:275380 3/20 (15%)
si:dkey-23k10.3XP_009290117.1 PPP1R42 59..360 CDD:455733 42/174 (24%)
leucine-rich repeat 60..88 CDD:275380
leucine-rich repeat 89..117 CDD:275380
leucine-rich repeat 118..146 CDD:275380
leucine-rich repeat 147..175 CDD:275380
leucine-rich repeat 176..203 CDD:275380 3/10 (30%)
leucine-rich repeat 205..233 CDD:275380 7/31 (23%)
leucine-rich repeat 234..262 CDD:275380 7/28 (25%)
leucine-rich repeat 263..291 CDD:275380 5/27 (19%)
PPP1R42 291..591 CDD:455733 66/299 (22%)
leucine-rich repeat 292..320 CDD:275380 8/27 (30%)
leucine-rich repeat 350..378 CDD:275380 8/27 (30%)
leucine-rich repeat 408..436 CDD:275380 7/27 (26%)
leucine-rich repeat 437..465 CDD:275380 9/27 (33%)
leucine-rich repeat 469..494 CDD:275381 0/24 (0%)
leucine-rich repeat 495..523 CDD:275381 3/27 (11%)
leucine-rich repeat 524..552 CDD:275381 9/27 (33%)
RNA1 <553..>688 CDD:444072 21/77 (27%)
leucine-rich repeat 553..581 CDD:275381 8/27 (30%)
leucine-rich repeat 582..610 CDD:275381 4/27 (15%)
leucine-rich repeat 611..639 CDD:275381 7/19 (37%)
leucine-rich repeat 640..668 CDD:275381
Blue background indicates that the domain is not in the aligned region.

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