DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG8197 and si:dkey-23k10.3

DIOPT Version :9

Sequence 1:NP_001286225.1 Gene:CG8197 / 35912 FlyBaseID:FBgn0033369 Length:387 Species:Drosophila melanogaster
Sequence 2:XP_009290117.1 Gene:si:dkey-23k10.3 / 100150225 ZFINID:ZDB-GENE-131126-11 Length:692 Species:Danio rerio


Alignment Length:445 Identity:98/445 - (22%)
Similarity:154/445 - (34%) Gaps:140/445 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    69 IIVNYLLRR-----PQLSVQISSLVVSNWDAGLLKDFVRSLLPVWYIE-LRLMR--FPREFFVML 125
            :::|..||.     .:|.:..:||...:  ..||...:.|  |.|.:: |:|:.  |..|....|
Zfish   192 VVLNKALRSNPSHLKELDLSENSLCYLH--TMLLSSVLES--PYWELKTLKLVNCSFTEEGGAAL 252

  Fly   126 RLNAAKMNVSQLSLEGTPLTDEDVRILREFLLVSK------TLRRLNVSSCSLTQFNFALIADGV 184
             ::|.:.|.|.  |....|:..::..|...:|.|.      .|..|.::.|.:|...||.:..|:
Zfish   253 -MSALRSNPSH--LRELDLSKNNIGYLTMMVLSSAMEIPYWELEILRLNDCGITDDGFAALGAGL 314

  Fly   185 YKSPGVRR---LSANRL-------LGMSL-----SLDTEKISS---------VLSSLLMQN---- 221
            ..:|...|   ||.|:|       |.::|     .|:|.::.|         ||.|.|..|    
Zfish   315 RSNPSYLRELDLSKNKLGEFGVHMLSIALEMPYCQLETLRLVSCDITGNGWIVLVSALRSNPSHL 379

  Fly   222 ---------------------------TLWALSLEHCELTAQDMIPIAEHLARTNSKFRRLRIAC 259
                                       .|..|.|.:|.|..::.:.:|..|....||.|.|.::.
Zfish   380 RNLDLSGNNLECFEIKLLSEVLESPYCKLETLKLRNCNLKDEECVSLASALRLKISKLRELDLSE 444

  Fly   260 NKIGPDG--AFFL-------------------------------------LRGMSMGGN------ 279
            ||:|..|  |||.                                     |:.:.:.||      
Zfish   445 NKLGDSGVKAFFAELEGHLSKFDALRFVNCGLTDEGCGVLASVLSSNPSHLKELDLSGNKVEDSG 509

  Fly   280 --------------LELLDLSYCSIGTHGGEWVAKYLAS-CRRLQVLHLNYNDMGPTAVNLILLA 329
                          ||.|.|..|.:...|...:|..|.| ...|:||.|:.|.:..:.|.||...
Zfish   510 VKMLSDGLEDYCCRLETLKLVGCGLTDEGCASLASALTSNSSHLRVLDLSKNKLSDSGVRLISTG 574

  Fly   330 MKK-QCKLEKLTLYGNHFDSRTAMIVRRLLDAEVVLHSELDISYTYDEALQDYRV 383
            ::. .||:|.|.|.....:......:...|........|||:|   :..|.|:.|
Zfish   575 LENPHCKVEILWLVDCDVNDEGCAALASALTFNFSNLRELDLS---ENNLGDFGV 626

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8197NP_001286225.1 leucine-rich repeat 134..161 CDD:275381 6/32 (19%)
LRR_RI 137..374 CDD:238064 76/358 (21%)
leucine-rich repeat 162..189 CDD:275381 7/26 (27%)
leucine-rich repeat 202..220 CDD:275380 8/31 (26%)
leucine-rich repeat 223..251 CDD:275380 7/27 (26%)
leucine-rich repeat 252..279 CDD:275380 10/65 (15%)
leucine-rich repeat 280..307 CDD:275380 9/27 (33%)
leucine-rich repeat 308..335 CDD:275380 8/27 (30%)
leucine-rich repeat 336..357 CDD:275380 3/20 (15%)
si:dkey-23k10.3XP_009290117.1 LRR_RI 59..360 CDD:238064 42/174 (24%)
leucine-rich repeat 60..88 CDD:275380
leucine-rich repeat 89..117 CDD:275380
leucine-rich repeat 118..146 CDD:275380
leucine-rich repeat 147..175 CDD:275380
leucine-rich repeat 176..203 CDD:275380 3/10 (30%)
leucine-rich repeat 205..233 CDD:275380 7/31 (23%)
leucine-rich repeat 234..262 CDD:275380 7/28 (25%)
leucine-rich repeat 263..291 CDD:275380 5/27 (19%)
LRR_RI 291..591 CDD:238064 66/299 (22%)
leucine-rich repeat 292..320 CDD:275380 8/27 (30%)
leucine-rich repeat 350..378 CDD:275380 8/27 (30%)
leucine-rich repeat 408..436 CDD:275380 7/27 (26%)
leucine-rich repeat 437..465 CDD:275380 9/27 (33%)
leucine-rich repeat 469..494 CDD:275381 0/24 (0%)
leucine-rich repeat 495..523 CDD:275381 3/27 (11%)
leucine-rich repeat 524..552 CDD:275381 9/27 (33%)
leucine-rich repeat 553..581 CDD:275381 8/27 (30%)
leucine-rich repeat 582..610 CDD:275381 4/27 (15%)
LRR_RI 609..635 CDD:197686 7/21 (33%)
leucine-rich repeat 611..639 CDD:275381 7/19 (37%)
leucine-rich repeat 640..668 CDD:275381
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4308
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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