DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG8170 and TMPRSS6

DIOPT Version :10

Sequence 1:NP_610441.2 Gene:CG8170 / 35908 FlyBaseID:FBgn0033365 Length:855 Species:Drosophila melanogaster
Sequence 2:NP_001275929.1 Gene:TMPRSS6 / 164656 HGNCID:16517 Length:824 Species:Homo sapiens


Alignment Length:519 Identity:146/519 - (28%)
Similarity:210/519 - (40%) Gaps:126/519 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   423 QGTRKSRYYPYKSSRSPRVVFPTNDNVGTTGPSGPAGSSGPSGNGVYFSDNIAFRDQNFGINELA 487
            ||...:.|:|  |..||:    |:.:...|.||...|.:      ::| |..|.|.|.:.:....
Human   339 QGVLSTPYFP--SYYSPQ----THCSWHLTVPSLDYGLA------LWF-DAYALRRQKYDLPCTQ 390

  Fly   488 AVQDVRND--YSLQDLDSASEATSSPQSAS---TFKEKVDITTDTECQHRG-----GTC--EFFL 540
            ....::|.  ..|:.|...:|......:|.   .|..::.:|......|.|     ..|  ||. 
Human   391 GQWTIQNRRLCGLRILQPYAERIPVVATAGITINFTSQISLTGPGVRVHYGLYNQSDPCPGEFL- 454

  Fly   541 GCWLSGGLIQGTCDGLL--------RGC-CHRTAKSAN-----------------LGSSD----- 574
             |.:: ||....|||:.        |.| |..|.:...                 |..||     
Human   455 -CSVN-GLCVPACDGVKDCPNGLDERNCVCRATFQCKEDSTCISLPKVCDGQPDCLNGSDEEQCQ 517

  Fly   575 -------FVGNAVDLTDLPQKN----------YGPVNNEPSCGISLAKQTAQRRIVGGDDAGFGS 622
                   |.....|.:.:.:.|          .|.......||:    |....|||||..:..|.
Human   518 EGVPCGTFTFQCEDRSCVKKPNPQCDGRPDCRDGSDEEHCDCGL----QGPSSRIVGGAVSSEGE 578

  Fly   623 FPWQAYIRI-GSSRCGGSLISRRHVVTAGHCV---ARATPRQVHVTLGDYVINSAVEPLPA-YTF 682
            :||||.::: |...|||:||:.|.|:||.||.   :.|:.....|.||....||.   .|. .:|
Human   579 WPWQASLQVRGRHICGGALIADRWVITAAHCFQEDSMASTVLWTVFLGKVWQNSR---WPGEVSF 640

  Fly   683 GVRRIDVHPYFKFTPQADRFDISVLTLERTVHFMPHIAPICLPEKNEDF-LGKFGWAAGWGALNP 746
            .|.|:.:|||.:  ..:..:|:::|.|:..|.....:.|:|||.::..| .|...|..|||||..
Human   641 KVSRLLLHPYHE--EDSHDYDVALLQLDHPVVRSAAVRPVCLPARSHFFEPGLHCWITGWGALRE 703

  Fly   747 GSRLR----------------------PKTLQAVDVPVIENRICERWHRQNGINVVIYQ---EML 786
            |: ||                      ...||.|||.:|...:|...:|        ||   .||
Human   704 GA-LRADAVALFYGWRNQGSETCCCPISNALQKVDVQLIPQDLCSEVYR--------YQVTPRML 759

  Fly   787 CAGYRNGGKDSCQGDSGGPLM-HDKNGRWYLIGVVSAGYSCASRGQPGIYHSVSKTVDWVSYVV 849
            |||||.|.||:|||||||||: ...:|||:|.|:||.|..|......|:|..::..:.|:..||
Human   760 CAGYRKGKKDACQGDSGGPLVCKALSGRWFLAGLVSWGLGCGRPNYFGVYTRITGVISWIQQVV 823

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8170NP_610441.2 Tryp_SPc 612..846 CDD:238113 94/265 (35%)
TMPRSS6NP_001275929.1 SEA 77..>134 CDD:460188
CUB 326..440 CDD:238001 24/113 (21%)
LDLa 450..480 CDD:238060 9/32 (28%)
LDLa 486..516 CDD:238060 3/29 (10%)
Ldl_recept_a 520..557 CDD:395011 4/36 (11%)
Tryp_SPc 568..822 CDD:238113 94/267 (35%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.