DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8170 and St14

DIOPT Version :10

Sequence 1:NP_610441.2 Gene:CG8170 / 35908 FlyBaseID:FBgn0033365 Length:855 Species:Drosophila melanogaster
Sequence 2:NP_446087.1 Gene:St14 / 114093 RGDID:69288 Length:855 Species:Rattus norvegicus


Alignment Length:543 Identity:142/543 - (26%)
Similarity:203/543 - (37%) Gaps:143/543 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   420 SEYQGTRKSRYYPYKSSRSP-------RVVFPTNDNVGT-------TGPSGPAG----------- 459
            ||.|||..|.|||   ...|       .:..|.|.||..       ..|:.|.|           
  Rat   345 SEAQGTFSSPYYP---GHYPPNINCTWNIKVPNNRNVKVRFKLFYLVDPNIPVGSCTKDYVEING 406

  Fly   460 ------------SSGPSGNGVYFSDNIAFRDQNFGINELA------------------AVQDVR- 493
                        ||..|...|:|..:.::.|..|....|:                  ..:|:| 
  Rat   407 EKFCGERSQFVVSSNSSKITVHFHSDHSYTDTGFLAEYLSYDSNDPCPGMFMCKTGRCIRKDLRC 471

  Fly   494 ------NDY-----------------------------SLQDLDSASEATSSPQSASTFKEKVDI 523
                  .||                             |:.|....|:.......|.:||     
  Rat   472 DGWADCPDYSDERHCRCNATHQFMCKNQFCKPLFWVCDSVNDCGDGSDEEGCSCPAGSFK----- 531

  Fly   524 TTDTECQHRGGTCEFFLGCWLSGGLIQGTCDGLLRGCCHR------TAKSANLGSSDFVGNAVDL 582
            .::.:|..:...|.....|  ..|..:.:||.:....|.:      .....|.|:.:..|     
  Rat   532 CSNGKCLPQSQQCNGKDDC--GDGSDEASCDNVNAVSCTKYTYRCQNGLCLNKGNPECDG----- 589

  Fly   583 TDLPQKNYGPVNNEPSCGISLAKQTAQRRIVGGDDAGFGSFPWQAYIR-IGSSR-CGGSLISRRH 645
                :|:....::|.:|...|...|.|.|:|||.:|..|.:|||..:. :|... ||.||||...
  Rat   590 ----KKDCSDGSDEKNCDCGLRSFTKQARVVGGTNADEGEWPWQVSLHALGQGHLCGASLISPDW 650

  Fly   646 VVTAGHCVARATPRQVHVTLGDYVINSA----VEPLPAYTFGV-----RRIDVHPYFK-FTPQAD 700
            :|:|.||....|    .....|:.:.:|    ::.......||     :||..||.|. ||..  
  Rat   651 LVSAAHCFQDET----IFKYSDHTMWTAFLGLLDQSKRSASGVQEHKLKRIITHPSFNDFTFD-- 709

  Fly   701 RFDISVLTLERTVHFMPHIAPICLPEKNEDF-LGKFGWAAGWGALNPGSRLRPKTLQAVDVPVIE 764
             :||::|.||:...:...:.|||||:....| .||..|..|||....|. .....||..::.||.
  Rat   710 -YDIALLELEKPAEYSTVVRPICLPDNTHVFPAGKAIWVTGWGHTKEGG-TGALILQKGEIRVIN 772

  Fly   765 NRICERWHRQNGINVVIYQEMLCAGYRNGGKDSCQGDSGGPLMH-DKNGRWYLIGVVSAGYSCAS 828
            ...||....|.     |...|:|.|:.:||.|||||||||||.. :|:||.:..||||.|..||.
  Rat   773 QTTCEELLPQQ-----ITPRMMCVGFLSGGVDSCQGDSGGPLSSVEKDGRIFQAGVVSWGEGCAQ 832

  Fly   829 RGQPGIYHSVSKTVDWVSYVVGL 851
            |.:||:|..:.:..||:....|:
  Rat   833 RNKPGVYTRIPEVRDWIKEQTGV 855

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8170NP_610441.2 Tryp_SPc 612..846 CDD:238113 89/247 (36%)
St14NP_446087.1 SEA 88..178 CDD:460188
CUB 214..332 CDD:238001
CUB 340..444 CDD:238001 24/101 (24%)
LDLa 454..486 CDD:238060 4/31 (13%)
LDLa 492..523 CDD:238060 3/30 (10%)
LDLa 525..559 CDD:238060 7/40 (18%)
LDLa 567..602 CDD:238060 6/43 (14%)
Tryp_SPc 615..852 CDD:238113 89/249 (36%)
Blue background indicates that the domain is not in the aligned region.

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