DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG13744 and tmprss3a

DIOPT Version :9

Sequence 1:NP_610439.1 Gene:CG13744 / 35906 FlyBaseID:FBgn0033363 Length:389 Species:Drosophila melanogaster
Sequence 2:XP_021334565.1 Gene:tmprss3a / 100000148 ZFINID:ZDB-GENE-070912-70 Length:543 Species:Danio rerio


Alignment Length:444 Identity:127/444 - (28%)
Similarity:194/444 - (43%) Gaps:94/444 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MQLLLWLCLCLLLLICQSSPSQANILNTLLGVPAECVHQ---------------SGVWPCKL--- 47
            |::|:..|:.|.|:|         :|...|||...|..:               .|.:.|:.   
Zfish   127 MEILIITCVLLTLII---------VLGIGLGVGLSCAGKFRCFSSRCISILAQCDGHFDCEHGED 182

  Fly    48 SFSCWLQGGKH---------------AKGCGSNKWLFSCCVAETQHPHQQQHHSPSSPLA----- 92
            ..||....||.               |:...||..|.:|    .|..:.:...|.:.||:     
Zfish   183 ELSCVRLSGKSSVLQVLNDGVWRTVCAENWNSNLSLSAC----KQLGYSRFVESKALPLSFIEQD 243

  Fly    93 ---NLVDYGKLKLNLNSLPKRIMLRRRDDNELLNPKPECGVPRT---------AQNTLQKRIIGG 145
               ||:..|   ||..|..:.:.:.    |...:.|.:|.:...         ::.....||:||
Zfish   244 YQNNLISIG---LNQTSFQQPVKIH----NITNSSKTKCSLGMVTALKCIACGSRPKFSARIVGG 301

  Fly   146 RPAQFAEYPWQAHIRIA-EYQCGGVLISANMVATAAHCIQQ-AHLADITVYLG--ELDTQDLGHI 206
            ..:...::|||..:... |:.|||.:|::..:.|||||:.. |:.....||.|  ||        
Zfish   302 NLSAEGQFPWQVSLHFQNEHLCGGSIITSRWILTAAHCVYGIAYPMYWMVYAGLTEL-------- 358

  Fly   207 HEPLPVEKHGVLQKII-HPRFNFRMTQPDRYDIALLKLAQPTSFTEHILPICLPQYPIRL-IGRK 269
              ||...|...::||| |.|:..:...   :||||:|||||.:|...:.|||||.:..:. .|:.
Zfish   359 --PLNAVKAFAVEKIIYHSRYRPKGLD---HDIALMKLAQPLTFNGMVEPICLPNFGEQFEDGKM 418

  Fly   270 GLIAGWGKTEAHMGHAGTNMLQVASVPIITTLDCIRWHESKQINVEIKAEMFCAGHSDGHMDACL 334
            ..|:|||.|| ..|.|..:. ..||||:|:...|   .:.:.....:.|.|.|||:.||..|:|.
Zfish   419 CWISGWGATE-DGGDASVSQ-HCASVPLISNKAC---SQPEVYQGYLTAGMICAGYLDGGTDSCQ 478

  Fly   335 GDSGGPLVIKERGRFVLVGITSAGFGCGVDHQPGIYHNVQKTVRWIQEVVARNE 388
            |||||||..::...:.|||.||.|.||...::||:|..:.:::.||...:.|.|
Zfish   479 GDSGGPLACEDSSIWKLVGATSWGQGCAEKNKPGVYTRITQSLTWIHLQMEREE 532

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13744NP_610439.1 Tryp_SPc 141..380 CDD:214473 88/244 (36%)
Tryp_SPc 142..383 CDD:238113 89/246 (36%)
tmprss3aXP_021334565.1 LDLa 154..186 CDD:238060 2/31 (6%)
SRCR_2 191..292 CDD:317845 20/111 (18%)
Tryp_SPc 298..525 CDD:238113 88/244 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X11
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.910

Return to query results.
Submit another query.