DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8172 and st14b

DIOPT Version :9

Sequence 1:NP_001097235.2 Gene:CG8172 / 35905 FlyBaseID:FBgn0033362 Length:561 Species:Drosophila melanogaster
Sequence 2:XP_005161261.1 Gene:st14b / 777629 ZFINID:ZDB-GENE-061103-613 Length:864 Species:Danio rerio


Alignment Length:314 Identity:111/314 - (35%)
Similarity:161/314 - (51%) Gaps:49/314 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   279 NAGEAADEYQSGGSGGYH--DASYR-----------P--------VPG-------CGEVYTRSNR 315
            :.|:.:||.:...|...|  |::|:           |        |.|       ||:...:|:|
Zfish   560 DCGDGSDESRCAKSIAVHCSDSTYKCKNKQCISKLNPMCDGETDCVDGSDEAECKCGKKPHKSSR 624

  Fly   316 IVGGHSTGFGSHPWQVALIKSGFLTRKLSCGGALISNRWVITAAHCVASTPNSNMKIRLG---EW 377
            ||||..:..|..||||:|   ...|:...||.::|||.|::||||||    ..|.:.|..   :|
Zfish   625 IVGGKDSDEGEWPWQVSL---HMKTQGHVCGASVISNSWLVTAAHCV----QDNDQFRYSQADQW 682

  Fly   378 DV----RGQEERLNHEEYGIERKEVHPHYNPADFVNDVALIRLDRNVVYKQHIIPVCLPPSTTKL 438
            :|    ..|.|.....:..:.|...||.|:.:.:.||:||:.||..|...|:|.|:|||..|...
Zfish   683 EVYLGLHNQGETSKSTQRSVLRIIPHPQYDHSSYDNDIALMELDSPVTLNQNIWPICLPDPTHYF 747

  Fly   439 -TGKMATVAGWGRTRHGQSTVPSVLQEVDVEVISNDRCQRWFRAAGRREAIHDVFLCAGYKDGGR 502
             .||...:.|||:.|.|...||||||:.:|.:|::..|.:..     .:.|....:|||...||.
Zfish   748 PAGKSVWITGWGKLREGSDAVPSVLQKAEVRIINSTVCSKLM-----DDGITPHMICAGVLSGGV 807

  Fly   503 DSCQGDSGGPL-TLTMDGRKTLIGLVSWGIGCGREHLPGVYTNIQRFVPWINKV 555
            |:||||||||: ::..:||..|.|:||||.||||.:.|||||.:..:..||.::
Zfish   808 DACQGDSGGPMSSIEGNGRMFLAGVVSWGDGCGRRNRPGVYTRVTDYRSWIREI 861

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8172NP_001097235.2 Tryp_SPc 315..552 CDD:214473 96/245 (39%)
Tryp_SPc 316..555 CDD:238113 97/247 (39%)
st14bXP_005161261.1 SEA 92..180 CDD:279699
CUB 233..342 CDD:238001
CUB 351..457 CDD:238001
LDLa 465..497 CDD:238060
LDLa 499..533 CDD:238060
LDLa 536..570 CDD:238060 3/9 (33%)
LDLa 578..613 CDD:238060 5/34 (15%)
Tryp_SPc 624..858 CDD:214473 96/245 (39%)
Tryp_SPc 625..861 CDD:238113 97/247 (39%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 188 1.000 Domainoid score I3236
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100031
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X11
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.810

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