DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG8172 and XB5723326

DIOPT Version :9

Sequence 1:NP_001097235.2 Gene:CG8172 / 35905 FlyBaseID:FBgn0033362 Length:561 Species:Drosophila melanogaster
Sequence 2:NP_001037931.1 Gene:XB5723326 / 733551 XenbaseID:XB-GENE-5723327 Length:349 Species:Xenopus tropicalis


Alignment Length:267 Identity:84/267 - (31%)
Similarity:130/267 - (48%) Gaps:23/267 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly   306 CGE--VYTRSNRIVGGHSTGF----GSHPWQVALIKSGFLTRKLSCGGALISNRWVITAAHCV-- 362
            ||.  .||   .:...:||..    |..||.|::.|...|..|..|.|.:::|.|:||||||.  
 Frog     3 CGNRPFYT---EVKASYSTELNPVEGKWPWIVSIQKKVELGYKHICAGTILNNEWIITAAHCFKD 64

  Fly   363 --ASTPNSNMKIRLGEWDVRGQEERLNHEEYGIERKEVHPHYNPADFVNDVALIRLDRNVVYKQH 425
              ...|.:.:::.||.:.:  .|..|..:..|:::...|..|:|....||:|||:||:.|.:..|
 Frog    65 WKEGDPTTPLRVLLGTFYL--SEIGLRTQSRGVKQLIKHDQYDPITESNDIALIQLDKQVEFSDH 127

  Fly   426 IIPVCLPPSTTKLTGKM-ATVAGWGRTRHGQSTVPSVLQEVDVEVISNDRCQRWFRAAGRREAIH 489
            |...|.|..:..|...: .::||||............|||..||.|....|.:|::.     .:.
 Frog   128 IQQACFPKESADLKDLIDCSIAGWGAQGKHLDEPSQFLQEAQVERIDTKHCNKWYQG-----ILG 187

  Fly   490 DVFLCAGYKDGGRDSCQGDSGGPLTLTMDGRK--TLIGLVSWGIGCGREHLPGVYTNIQRFVPWI 552
            :..||||::.|...:|.||.|.||........  ::||:::||.|||:...||||:.||..:.||
 Frog   188 ENHLCAGHRKGPEKTCNGDRGSPLMCRTKKNNVYSVIGILNWGSGCGQTRSPGVYSPIQSHIKWI 252

  Fly   553 NKVMAND 559
            .:.:.|:
 Frog   253 VEKVKNE 259

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8172NP_001097235.2 Tryp_SPc 315..552 CDD:214473 77/247 (31%)
Tryp_SPc 316..555 CDD:238113 79/249 (32%)
XB5723326NP_001037931.1 Tryp_SPc 25..252 CDD:214473 75/233 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X11
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.910

Return to query results.
Submit another query.