DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8172 and Ovch2

DIOPT Version :10

Sequence 1:NP_001097235.2 Gene:CG8172 / 35905 FlyBaseID:FBgn0033362 Length:561 Species:Drosophila melanogaster
Sequence 2:XP_003749007.2 Gene:Ovch2 / 308919 RGDID:1564636 Length:579 Species:Rattus norvegicus


Alignment Length:289 Identity:106/289 - (36%)
Similarity:158/289 - (54%) Gaps:43/289 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   296 HDASYRPV--PGCGE---------VYTRSNRIVGGHSTGFGSHPWQVALIKSGFLTRKLSCGGAL 349
            |.|:...:  |.||:         .::..:|||||.....||:||||:|.:.    :|..|||.:
  Rat    21 HSATLSSIRAPDCGKSLVKPWPQNYFSLFSRIVGGSQVEKGSYPWQVSLKQK----QKHICGGTI 81

  Fly   350 ISNRWVITAAHCVASTPNSNMKIRL----GEWDVRGQEERLNHEEYGIERKEVHPHYNPADFVN- 409
            ||::||||||||:|   |.|:.:.|    ||.|:...|.  ..:...||...:||.::....:| 
  Rat    82 ISSQWVITAAHCMA---NRNIALTLNVTAGEHDLSQAEP--GEQTLAIETIIIHPQFSTKKPMNY 141

  Fly   410 DVALIRLDRNVVYKQHIIPVCLP-PSTTKLTGKMATVAGWGRTRHGQSTVPSVLQEVDVEVISND 473
            |:||:::.....:.|.:.||||| |......|.:.|.|||||...|.| :|.|||:|::.:::::
  Rat   142 DIALLKMVGTFQFGQFVRPVCLPEPGEQFNAGYICTTAGWGRLSEGGS-LPQVLQQVNLPILTHE 205

  Fly   474 RCQRWFRAAGRREAIHDVFLCAGYKDGGRDSCQGDSGGPLTLTMDGRK---TLIGLVSWGIGCGR 535
            .|:...... |.......|||.|..|||||:|||||||  :|....||   ||.|:.|||:||||
  Rat   206 ECEAVMLTL-RNPITGKTFLCTGSPDGGRDACQGDSGG--SLMCQNRKGAWTLAGVTSWGLGCGR 267

  Fly   536 ----------EHLPGVYTNIQRFVPWINK 554
                      :..||::|:::|.:|||::
  Rat   268 SWRNNARKKEQGSPGIFTDLRRVLPWIHE 296

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8172NP_001097235.2 Tryp_SPc 316..555 CDD:238113 100/258 (39%)
Ovch2XP_003749007.2 Tryp_SPc 52..297 CDD:238113 100/258 (39%)
CUB 317..420 CDD:238001
CUB 431..541 CDD:238001
Blue background indicates that the domain is not in the aligned region.

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