DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG8172 and Gzma

DIOPT Version :10

Sequence 1:NP_001097235.2 Gene:CG8172 / 35905 FlyBaseID:FBgn0033362 Length:561 Species:Drosophila melanogaster
Sequence 2:NP_703198.2 Gene:Gzma / 266708 RGDID:628640 Length:261 Species:Rattus norvegicus


Alignment Length:269 Identity:80/269 - (29%)
Similarity:122/269 - (45%) Gaps:51/269 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   302 PVPGCGEVYTRSNRIVGGHSTGFGSHPWQVALIKSGFLTRKLS----CGGALISNRWVITAAHCV 362
            |..||       .||:||.:....|.|:.|.|        ||.    |.||||:..||:|||||:
  Rat    22 PEGGC-------ERIIGGDTVVPHSRPYMVLL--------KLKPDSVCAGALIAKNWVLTAAHCI 71

  Fly   363 ASTPNSNMKIRLGEWDVRGQEERLNHEEYGIERKEVHPHYNPADFVNDVALIRLDRNVVYKQHII 427
               |....::.||...::.:.|:   :...:::...:|.::......|:.|:||.:.....:::.
  Rat    72 ---PGKKSEVILGAHSIKKEPEQ---QILSVKKAYPYPCFDKHTHEGDLQLLRLKKKATLNKNVA 130

  Fly   428 PVCLPPSTTKL-TGKMATVAGWGRTRHGQSTVPSVLQEVDVEVISNDRCQRWFRAAGRREAIHDV 491
            .:.||.....: .|....||||||. |.:|.....|:||::.||....|         .:..|..
  Rat   131 ILHLPKKGDDVKPGTRCHVAGWGRF-HNKSPPSDTLREVNITVIDRKIC---------NDEKHYN 185

  Fly   492 F--------LCAGYKDGGRDSCQGDSGGPLTLTMDGRKTLIGLVSWGI--GCGREHLPGVYTNI- 545
            |        :|||...||:|||.|||||||......|    |:.::|:  .||....||:||.: 
  Rat   186 FNPVIGLNMICAGNLRGGKDSCYGDSGGPLLCEGIFR----GITAFGLEGTCGDPKGPGIYTLLS 246

  Fly   546 QRFVPWINK 554
            .:.:.||.|
  Rat   247 DKHLDWIRK 255

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8172NP_001097235.2 Tryp_SPc 316..555 CDD:238113 76/255 (30%)
GzmaNP_703198.2 Tryp_SPc 29..256 CDD:238113 76/255 (30%)

Return to query results.
Submit another query.