DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG8172 and Tmprss3

DIOPT Version :9

Sequence 1:NP_001097235.2 Gene:CG8172 / 35905 FlyBaseID:FBgn0033362 Length:561 Species:Drosophila melanogaster
Sequence 2:NP_001157248.1 Gene:Tmprss3 / 140765 MGIID:2155445 Length:475 Species:Mus musculus


Alignment Length:365 Identity:114/365 - (31%)
Similarity:154/365 - (42%) Gaps:78/365 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   211 PSSSSSSSL--NSWEHETGGHLGSISGITNHLDSFFDAESQAPLDSAGAPPPHEPLPNAQAFAVG 273
            ||..||..|  ::.|.:..|...||    |||           |........|..:...:....|
Mouse   170 PSYVSSDHLRVDALEEQFQGDFVSI----NHL-----------LSDDKVTALHHSVYMREGCTSG 219

  Fly   274 NVLDLNAGEAADEYQSGGSGGYHDASYRPVPGCGEVYTRSNRIVGGHSTGFGSHPWQVALIKSGF 338
            :|:.|...                       .||.....|.|||||:.:.....||||:|...|:
Mouse   220 HVVTLKCS-----------------------ACGTRTGYSPRIVGGNMSSLTQWPWQVSLQFQGY 261

  Fly   339 LTRKLSCGGALISNRWVITAAHCVAST--PNSNMKIRLGEWDVR-GQEERLNH--EEYGIERKEV 398
            ..    |||::|:..|::||||||...  |.|        |.|: |....::.  ..:.:|:...
Mouse   262 HL----CGGSIITPLWIVTAAHCVYDLYHPKS--------WTVQVGLVSLMDSPVPSHLVEKIIY 314

  Fly   399 HPHYNPADFVNDVALIRLDRNVVYKQHIIPVCLPPSTTKL-TGKMATVAGWGRTRHGQSTVPSVL 462
            |..|.|....||:||::|...:.:.:.|.|:|||.|.... .||:...:|||.|..|....| ||
Mouse   315 HSKYKPKRLGNDIALMKLSEPLTFDETIQPICLPNSEENFPDGKLCWTSGWGATEDGGDASP-VL 378

  Fly   463 QEVDVEVISNDRCQRWFRAAGRREAIHDVF--------LCAGYKDGGRDSCQGDSGGPLTLTMDG 519
            ....|.:|||..|..           .||:        |||||..||.|||||||||||......
Mouse   379 NHAAVPLISNKICNH-----------RDVYGGIISPSMLCAGYLKGGVDSCQGDSGGPLVCQERR 432

  Fly   520 RKTLIGLVSWGIGCGREHLPGVYTNIQRFVPWINKVMAND 559
            ...|:|..|:||||...:.|||||.|..|:.||::.:..|
Mouse   433 LWKLVGATSFGIGCAEVNKPGVYTRITSFLDWIHEQLERD 472

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8172NP_001097235.2 Tryp_SPc 315..552 CDD:214473 91/250 (36%)
Tryp_SPc 316..555 CDD:238113 92/252 (37%)
Tmprss3NP_001157248.1 LDLa 96..129 CDD:238060
SRCR_2 134..233 CDD:292133 19/100 (19%)
Tryp_SPc 238..465 CDD:214473 91/250 (36%)
Tryp_SPc 239..468 CDD:238113 92/252 (37%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100031
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X11
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.810

Return to query results.
Submit another query.