DRSC/TRiP Functional Genomics Resources

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Protein Alignment Np and Tmprss2

DIOPT Version :9

Sequence 1:NP_001246213.1 Gene:Np / 35904 FlyBaseID:FBgn0265011 Length:1041 Species:Drosophila melanogaster
Sequence 2:NP_056590.2 Gene:Tmprss2 / 50528 MGIID:1354381 Length:490 Species:Mus musculus


Alignment Length:490 Identity:142/490 - (28%)
Similarity:201/490 - (41%) Gaps:101/490 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   614 PPTNASISN----DWQPAPPSNWLPLTTESSETADKTSASTAPPSATDKVVISVATSVSEVETHG 674
            ||...:..|    .:.|:|...:.|..|        |.|||                 |.:.||.
Mouse    30 PPVAPNGYNLYPAQYYPSPVPQYAPRIT--------TQAST-----------------SVIHTHP 69

  Fly   675 PGKPQKTTKPPKPS---STAKPTTTTTAAATTIV---------KTTEAPASSIELASSTSSYTD- 726
            .......|...|.|   :.|..|..|.||...::         .|:|....|.....|:|.:.| 
Mouse    70 KSSGALCTSKSKKSLCLALALGTVLTGAAVAAVLLWRFWDSNCSTSEMECGSSGTCISSSLWCDG 134

  Fly   727 -----LGSD-------------LAASSSS--------STTTTTSSPTTAAETTDYSGEEPNTTTI 765
                 .|.|             |...||.        ....:.|....|.:...|.....::..|
Mouse   135 VAHCPNGEDENRCVRLYGQSFILQVYSSQRKAWYPVCQDDWSESYGRAACKDMGYKNNFYSSQGI 199

  Fly   766 -EATGSTTVAPANALEG-VD-YKEV------------------CG-RRMFPEPRIVGGANAAFGR 808
             :.:|:|:....|...| || ||::                  || |.:..:.|||||.||:.|.
Mouse   200 PDQSGATSFMKLNVSSGNVDLYKKLYHSDSCSSRMVVSLRCIECGVRSVKRQSRIVGGLNASPGD 264

  Fly   809 WPWQISLRQWRTSTYLHKCGAALLNENWAITAAHCVDNVPPSDLLLRLGEYDLAEEEEPYGYQER 873
            ||||:||.    ...:|.||.:::...|.:||||||:....|..........|.:....|| ...
Mouse   265 WPWQVSLH----VQGVHVCGGSIITPEWIVTAAHCVEEPLSSPRYWTAFAGILRQSLMFYG-SRH 324

  Fly   874 RVQIVASHPQFDPRTFEYDLALLRFYEPVIFQPNIIPVCVPDNDENF-IGQTAFVTGWGRLYEDG 937
            :|:.|.|||.:|.:|...|:||::...|:.|...:.|||:|:..... :.|..:::|||..||.|
Mouse   325 QVEKVISHPNYDSKTKNNDIALMKLQTPLAFNDLVKPVCLPNPGMMLDLDQECWISGWGATYEKG 389

  Fly   938 PLPSVLQEVAVPVINNTICESMYRSAGYIEHIPHIFICAGWKKGGYDSCEGDSGGPMVLQRESDK 1002
            ....||....||:|..:.|.|.|.   |...|....||||:.:|..|||:||||||:|..:..  
Mouse   390 KTSDVLNAAMVPLIEPSKCNSKYI---YNNLITPAMICAGFLQGSVDSCQGDSGGPLVTLKNG-- 449

  Fly  1003 RFHLGGVISWGIGCAEANQPGVYTRISEFRDWINQ 1037
            .:.|.|..|||.|||:|.:||||..::.|.|||.|
Mouse   450 IWWLIGDTSWGSGCAKALRPGVYGNVTVFTDWIYQ 484

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NpNP_001246213.1 Tryp_SPc 797..1035 CDD:214473 91/238 (38%)
Tryp_SPc 798..1038 CDD:238113 93/241 (39%)
Tmprss2NP_056590.2 LDLa 112..147 CDD:238060 8/34 (24%)
SRCR_2 152..247 CDD:373897 17/94 (18%)
Tryp_SPc 254..485 CDD:238113 93/241 (39%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 190 1.000 Domainoid score I3257
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm8807
orthoMCL 1 0.900 - - OOG6_100031
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X11
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.810

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