DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Np and hgfa

DIOPT Version :10

Sequence 1:NP_610437.2 Gene:Np / 35904 FlyBaseID:FBgn0265011 Length:1041 Species:Drosophila melanogaster
Sequence 2:XP_005164799.1 Gene:hgfa / 493781 ZFINID:ZDB-GENE-041014-2 Length:712 Species:Danio rerio


Alignment Length:414 Identity:97/414 - (23%)
Similarity:147/414 - (35%) Gaps:107/414 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   687 PSSTAKPTTTTTAAATTIVKTTEAPASSIELASSTSSYTDLGSDLAASSSSSTT----------- 740
            |..:..|...||.|.......|..|....|.:.||..|.|.|.....:.|.:.:           
Zfish   339 PDGSEIPWCFTTDAKVRKAFCTNIPRCESESSDSTECYEDNGESYRGNLSKTRSGIPCGLWSDHT 403

  Fly   741 ----TTTSSPTTAAETT-----------------------DYSGEEPNTTTIEATGSTTVAPANA 778
                |.::..:...|..                       ||.|.|               ...:
Zfish   404 FRRDTRSAKASAGLELNLCRNPDRDKHGPWCYTSNSSIPWDYCGLE---------------RCKS 453

  Fly   779 LEGVDYKEVCGRRMFPEP--------RIVGG---ANAAFGRWPWQISLRQWRTSTYLHKCGAALL 832
            :...|::...|    |:|        |||||   ..|..|  .|.:|:::...    |.||.:|:
Zfish   454 MSSDDHQMSGG----PKPSCFIHKTTRIVGGMRVQRAEDG--SWVVSIQKGNR----HWCGGSLI 508

  Fly   833 NENWAITAAHCVDNVPPSDLLLRLGEY----DLAEEEEPYGYQERRVQIVASHPQFDPRTFEYDL 893
            .|.|.:|...|.....|.     |.||    .|.......|.|..|:..|...|:..      :|
Zfish   509 REEWVLTDQQCFSTCVPD-----LSEYTVQVGLLHLNASAGTQALRIAHVVCGPEGS------NL 562

  Fly   894 ALLRFYEPVIFQPNI----IPV--CVPDNDENFIGQTAFVTGWGRLYEDGPLPSVLQEVAVPVIN 952
            |||:...|.....::    :||  |....     |....:.|||.....|...| |:.|.:|:::
Zfish   563 ALLKLTTPAPLSEHVRTVQLPVAGCAVAE-----GTLCLMYGWGDTKGTGHEGS-LKMVGLPIVS 621

  Fly   953 NTICESMYRSAGYIEHIPHIFICAGWKKGGYDSCEGDSGGPMVLQRESDKRFHLGGVISWGIGCA 1017
            |..|...:..   |..|....||||.|: ....||.|.|||:|.| |.:.:..:|..|: |.|||
Zfish   622 NKRCSQSHNG---ILPITETKICAGGKR-DQGVCEKDYGGPLVCQ-EGESKVIVGVSIN-GRGCA 680

  Fly  1018 EANQPGVYTRISEFRDWINQILQF 1041
            .|.:|.|:..::.:.:||.::.::
Zfish   681 VARRPAVFVNVAFYSEWIRKVFKY 704

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NpNP_610437.2 Tryp_SPc 798..1038 CDD:238113 72/252 (29%)
hgfaXP_005164799.1 PAN_AP_HGF <50..107 CDD:238532
KR 111..192 CDD:238056
KR 195..275 CDD:214527
KR 287..367 CDD:214527 7/27 (26%)
KR 374..451 CDD:214527 10/91 (11%)
Tryp_SPc 477..701 CDD:238113 72/252 (29%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.