DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Np and Corin

DIOPT Version :9

Sequence 1:NP_001246213.1 Gene:Np / 35904 FlyBaseID:FBgn0265011 Length:1041 Species:Drosophila melanogaster
Sequence 2:NP_610297.2 Gene:Corin / 35691 FlyBaseID:FBgn0033192 Length:1397 Species:Drosophila melanogaster


Alignment Length:1054 Identity:223/1054 - (21%)
Similarity:362/1054 - (34%) Gaps:264/1054 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   135 PEINDNSIDQNTISHFSHESTTLPTSALFKLTTESSLSSSSSSGSSTAHHHTTNELLKNVTQSYL 199
            |.:..:|...|:|.....:|:..|:|    ::..:|.||::|:||||         :.:.|.|.:
  Fly   405 PPVKGSSNSSNSIGETQSQSSKEPSS----VSASASTSSAASAGSST---------ISSGTMSSM 456

  Fly   200 STAKPAPVRTTSNGTLSTTRR--PPLAHTTHKNSHYVVRTTMKPSAAPTTTITPTVKPPRRRTTT 262
            |...||.|..|.    :.|:|  ||.......|....|.|..:....|..|:       |.:...
  Fly   457 SGPCPAVVPPTD----AITKRPGPPEPPLRQANVFDPVETGSRGHPPPPLTV-------RNKLGR 510

  Fly   263 AKPVLTTAPIVEQRIETTSVPTKFVTFQIVETTTPAVTEPTHQQETTTTTTRRHTRPTGSSSVAS 327
            .||...|.|.::||.::|.....:..     :::|...  :...|.....:::..|.:.:...|.
  Fly   511 NKPPPITYPRMQQRQDSTLSSDSYSI-----SSSPGYN--SKLMEAPLLGSQQGGRKSNAPGSAQ 568

  Fly   328 RTTSKTTTTTT-----------TTTTTTAAPP----------TTTSTRAATTTQRP--TPPLRTT 369
            |.|.......|           :.....|.||          :|.|:.:.:.|..|  .|.|...
  Fly   569 RQTPLMDLAPTRFLGGAGGGTGSGKQGPAMPPPRSKINFRQDSTISSDSFSQTSSPGYNPKLMEA 633

  Fly   370 TSKPHKTHSSRRPAPAKKPVSTTTTTASGTQSTRKPADSLASGSTTANGTTATTLPARRPVTQTS 434
            ...|  :.|::|...|..|:    ....|.|  .:|.:.|....|.:        |..:...|.|
  Fly   634 PLLP--SLSAKRLCSAPAPI----VCRQGVQ--HEPIEELEPPQTIS--------PLHKAAGQPS 682

  Fly   435 SSSTTTTSTTSTITTTVFKDELPKNR-------TTTRLPERTTQAPRPRPKPTGEIVKVPALLAE 492
            |..|..........|...:.::...|       |..||..|..|.          ::...|||| 
  Fly   683 SLQTIVRFQNGAPHTMSLQHQIINRRKSSNPYITNGRLKFRLFQI----------LINAFALLA- 736

  Fly   493 PTTTTVTKGSSSSSSSSPKPPASSTTPLVTKKKPTTTNAPTTTTTTTTTTTTTTTPKPTRRTKPP 557
                 :..|.::..::.|      |...|.|....|.:...||:........|..|...|..:.|
  Fly   737 -----IAGGLAAYFNAYP------TIKFVNKTIINTIHVEDTTSFGKNPAPGTCLPIIVRFCQGP 790

  Fly   558 TTTTTTTT------------KATTTTTKATTTTTTAKPLIT----------------TEPPTSAP 594
            ......|.            ..|...:...........|::                |.||....
  Fly   791 QIPYNYTVFPNYIGHFGQLETQTDLDSYEALVDVRCYELVSLFLCTLFVPKCGQSGATVPPCKTL 855

  Fly   595 LTTTTKKTGLITWTDV---EAEPPTNASISNDWQPAPPSN------------------------- 631
            .|.|.::.|.  :.||   ......|..:..|:    ||:                         
  Fly   856 CTETMRRCGF--FFDVFGLSLPEYLNCKLFKDF----PSSEDCVGLDEVREVMRAATHPKCDGFQ 914

  Fly   632 -----WLPLT------TESSETADKTSASTAPPS--------------ATDKVVI---------- 661
                 .||..      .:..:.||:.......|.              ..|.::.          
  Fly   915 CDQNRCLPQEYVCDGHLDCMDQADEAKCERCGPDEIYCGDSQCIGTKHICDGIIDCPYGQDERNC 979

  Fly   662 --------SVATSVSEVETHG-----PGKPQKTTKPPKPSSTAKPTTTTTAAATTIV-KTTEAPA 712
                    .|.|.|.||...|     |...:...:...||:.......:...||::: :.|..| 
  Fly   980 LRLSERNGDVGTGVLEVYRIGQRQWMPACVKNWDRAVSPSAVCSILGYSAVNATSVLTQLTHRP- 1043

  Fly   713 SSIELASSTSSYTDLGSDLAASSSSSTTTTTSSPTTAAETTDYSGEEPNTTTIEATGSTTVAPAN 777
                |.::.:..||:....|...|    |.........:|.||                   |..
  Fly  1044 ----LLATVNVSTDIWKMYAKRKS----TLMQEFANCKKTEDY-------------------PMA 1081

  Fly   778 ALEGVDYKEVCGR----RMFPEPRIVGGANAAFGRWPWQISLRQWRTSTYLHKCGAALLNENWAI 838
            .|...:|:  |||    |..|..||:||..|:.|.||:..::.......:.  |...|:::.|.:
  Fly  1082 DLTCSNYE--CGRVKRGRHKPSRRIIGGTQASPGNWPFLAAILGGPEKIFY--CAGVLISDQWVL 1142

  Fly   839 TAAHCVDNVPPSDL---LLRLGEYDLAEEEEPYGYQERRVQIVASHPQFDPR-TFEYDLALLRFY 899
            ||:|||.|....||   .::||.  .......|..|:.:|:.|..|||::.. ..:.|:||.:..
  Fly  1143 TASHCVGNYSVIDLEDWTIQLGV--TRRNSFTYSGQKVKVKAVIPHPQYNMAIAHDNDIALFQLA 1205

  Fly   900 EPVIFQPNIIPVCVPDNDENFI--GQTAFVTGWGRLYEDGPLPS---VLQEVAVPVINNTICESM 959
            ..|.|..:::|||:|......:  |....|.|||:..:..|..:   ::.||.||:|....|:..
  Fly  1206 TRVAFHEHLLPVCLPPPSVRNLHPGTLCTVIGWGKREDKDPKSTYEYIVNEVQVPIITRNQCDEW 1270

  Fly   960 YRSAGYIEHIPHIFICAGWKKGGYDSCEGDSGGPMVLQRESDK-RFHLGGVISWGIGCAEANQPG 1023
            ..:....|.:    :|||:..||.|:|:||||||::.....:| |:.:||::||||.||....||
  Fly  1271 LDNLTVSEGM----VCAGFDDGGKDACQGDSGGPLLCPYPGEKNRWFVGGIVSWGIMCAHPRLPG 1331

  Fly  1024 VYTRISEFRDWINQ 1037
            ||..:.::..||.:
  Fly  1332 VYANVVQYVPWIQE 1345

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NpNP_001246213.1 Tryp_SPc 797..1035 CDD:214473 77/247 (31%)
Tryp_SPc 798..1038 CDD:238113 78/250 (31%)
CorinNP_610297.2 CRD_FZ 778..894 CDD:143549 19/121 (16%)
LDLa 911..942 CDD:238060 4/30 (13%)
LDLa 945..979 CDD:238060 2/33 (6%)
SR 980..>1034 CDD:214555 10/53 (19%)
SRCR 992..1086 CDD:278931 22/121 (18%)
Tryp_SPc 1103..1343 CDD:214473 77/247 (31%)
Tryp_SPc 1104..1346 CDD:238113 78/250 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24253
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.010

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