DRSC/TRiP Functional Genomics Resources

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Protein Alignment Np and tmprss4b

DIOPT Version :9

Sequence 1:NP_001246213.1 Gene:Np / 35904 FlyBaseID:FBgn0265011 Length:1041 Species:Drosophila melanogaster
Sequence 2:NP_001119849.1 Gene:tmprss4b / 327651 ZFINID:ZDB-GENE-030131-5862 Length:432 Species:Danio rerio


Alignment Length:351 Identity:109/351 - (31%)
Similarity:173/351 - (49%) Gaps:70/351 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   702 TTIVKTTEAPASSI------ELA--SSTSSYTDLGSDLAASSSSSTTTTTSSPTTAAETTDYSGE 758
            |...::|..|..|:      |.|  |:.|:.:|:.|.|:||:..|:.:..|...:          
Zfish   137 TVSPRSTRIPVRSLFFNPQNEFATVSNDSAQSDIQSFLSASNKCSSGSVVSVSCS---------- 191

  Fly   759 EPNTTTIEATGSTTVAPANALEGVDYKEVCGRRMFPEPRIVGGANAAFGRWPWQISLRQWRTSTY 823
                                    |..||.|     |.|||||...:...||||:||:    ..:
Zfish   192 ------------------------DCGEVVG-----EDRIVGGVETSIEHWPWQVSLQ----FNH 223

  Fly   824 LHKCGAALLNENWAITAAHCVDNVPP--SDLLLRLGEYDLAEEEEPYGYQERRVQIVASHPQFDP 886
            .|.||.:||:.:|.|:||||......  |...:.||:   .:..:..|..   |.::..|..::.
Zfish   224 RHMCGGSLLSTSWIISAAHCFTGRTQELSRWTVVLGQ---TKVMDVVGVS---VDMIVIHKDYNR 282

  Fly   887 RTFEYDLALLRFYEPVIFQPNIIPVCVPDNDENFIGQTAFVTGWGRLYEDGPLPSVLQEVAVPVI 951
            .|.::|:|:|:...||....:|:|||:|.: :..|.....|||||.|.|.|.||:|||:.:||::
Zfish   283 LTNDFDIAMLKLTWPVKTGESILPVCLPPH-QLAIKDMLVVTGWGLLKEGGALPTVLQKASVPLV 346

  Fly   952 NNTICE--SMYRSAGYIEHIPHIFICAGWKKGGYDSCEGDSGGPMVLQRESDKRFHLGGVISWGI 1014
            |.:.|.  ::|.|:     |....:|||:.:|..|:|:||||||:|.   ...|:.|.|::|||:
Zfish   347 NRSECSKPTIYSSS-----ITPRMLCAGFLQGNVDACQGDSGGPLVY---LSSRWQLIGIVSWGV 403

  Fly  1015 GCAEANQPGVYTRISEFRDWINQILQ 1040
            |||...:||||..:::..|||..:::
Zfish   404 GCAREGKPGVYADVTQLLDWIYTVME 429

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NpNP_001246213.1 Tryp_SPc 797..1035 CDD:214473 87/241 (36%)
Tryp_SPc 798..1038 CDD:238113 88/243 (36%)
tmprss4bNP_001119849.1 SRCR_2 100..179 CDD:292133 13/41 (32%)
SRCR 105..>175 CDD:278931 10/37 (27%)
Tryp_SPc 201..424 CDD:214473 87/241 (36%)
Tryp_SPc 202..427 CDD:238113 88/243 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100031
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X11
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.810

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