DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Np and CG6048

DIOPT Version :10

Sequence 1:NP_610437.2 Gene:Np / 35904 FlyBaseID:FBgn0265011 Length:1041 Species:Drosophila melanogaster
Sequence 2:NP_572282.1 Gene:CG6048 / 31528 FlyBaseID:FBgn0029827 Length:362 Species:Drosophila melanogaster


Alignment Length:248 Identity:49/248 - (19%)
Similarity:82/248 - (33%) Gaps:84/248 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 SSSASGPFLQRIATLTEQISY-MAYKDPLEELFIIQC----------ALTALRLEVLVNNP-KLT 84
            ||.|...:  |::..|...:| ...:.||      ||          |.....::.:|..| ::.
  Fly    50 SSFAGNSY--RVSAPTFNANYDCVSEQPL------QCAPASGDSKSSAFAVFDMKYIVEIPNRIP 106

  Fly    85 TID-LTRNRIRQL-------------FPITTPPKTKLSVTSLSLVANQLEHLDMSMFAFMPKLEL 135
            ::. .||||:..:             .|:   .||.|.:|.:..:                    
  Fly   107 SVKCFTRNRLFDMESAIVEQYRKDGKLPL---EKTALHLTEVGCI-------------------- 148

  Fly   136 FDVRGNRIVRLEATAPFDTRNLTLPVLRSLYIDDNALTELP--THWGKLPNLV-YLGFDRNYLKR 197
             :..|:.|:. |.|....:..:|||.           |.||  .:..|.|.|: ...||:.|   
  Fly   149 -EYGGSTIIG-EDTTTKKSGGITLPP-----------TVLPEDCNCSKPPQLITQTIFDKQY--- 197

  Fly   198 IDISFFGKFPTLNAIFICENNVETI---RTSTPITMPELDIMLFESNQIVSVN 247
               :|  .||.....|...:...|:   ..|...:..:..||.|....|::.|
  Fly   198 ---AF--NFPQTKFTFGTPSFTYTVGCQHVSMICSSSQKAIMFFNDQYIINGN 245

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NpNP_610437.2 Tryp_SPc 798..1038 CDD:238113
CG6048NP_572282.1 Tryp_SPc 45..284 CDD:214473 49/248 (20%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.