DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Np and F10

DIOPT Version :10

Sequence 1:NP_610437.2 Gene:Np / 35904 FlyBaseID:FBgn0265011 Length:1041 Species:Drosophila melanogaster
Sequence 2:NP_058839.1 Gene:F10 / 29243 RGDID:61850 Length:482 Species:Rattus norvegicus


Alignment Length:323 Identity:98/323 - (30%)
Similarity:145/323 - (44%) Gaps:52/323 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   733 ASSSSSTTTTTSSPTTAAETTD----YSGEEP------NTTTIEATGSTTVAPANALEGVDYKEV 787
            |..|.:..|:.|.|.......|    |..|.|      |.|..||.....:              
  Rat   180 AKRSVALNTSNSEPDPEDLMPDADILYPTESPSELLNLNKTEPEANSDDVI-------------- 230

  Fly   788 CGRRMFPEPRIVGGANAAFGRWPWQISL-RQWRTSTYLHKCGAALLNENWAITAAHCVDNVPPSD 851
                     |||||.....|..|||..| ....|..:   ||..:|||.:.:|||||:...  ..
  Rat   231 ---------RIVGGQECKRGECPWQALLFSDEETDGF---CGGTILNEFYILTAAHCLHQA--KR 281

  Fly   852 LLLRLGEYDLAEEEEPYGYQERRVQIVASHPQFDPRTFEYDLALLRFYEPVIFQPNIIPVCVPDN 916
            ..:|:|  ||..|:|..|.....|.::..|.:|...|:::|:|:||...|:.|:.|:.|.|:|..
  Rat   282 FKVRVG--DLNTEQEDGGEMVHEVDMIIKHNKFQRDTYDFDIAMLRLKTPITFRENVAPACLPQK 344

  Fly   917 D----ENFIGQTAFVTGWGRLYEDGPLPSVLQEVAVPVINNTICESMYRSAGYIEHIPHIFICAG 977
            |    .....:|..|:|:||.:|.|....||:.:.||.::...|.   .|..:  .|.....|||
  Rat   345 DWAEATLMTQKTGIVSGFGRTHEKGRQSKVLKMMEVPYVDRNTCR---LSTSF--SITQNMFCAG 404

  Fly   978 WKKGGYDSCEGDSGGPMVLQRESDKRFHLGGVISWGIGCAEANQPGVYTRISEFRDWINQILQ 1040
            :.....|:|:||||||.| .|..|..| :.|::|||.|||...:.|:||:::.|..||::.::
  Rat   405 YDAKQEDACQGDSGGPHV-TRFKDTYF-VTGIVSWGEGCARKGKYGIYTKVTAFLKWIDRSMK 465

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NpNP_610437.2 Tryp_SPc 798..1038 CDD:238113 84/244 (34%)
F10NP_058839.1 GLA 23..84 CDD:214503
EGF_CA 86..122 CDD:238011
FXa_inhibition 129..164 CDD:464251
Tryp_SPc 232..462 CDD:238113 84/243 (35%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.